#------------------------------------------------------------------------------ #$Date: 2016-03-26 12:54:03 +0100 (Sat, 26 Mar 2016) $ #$Revision: 180239 $ #$URL: svn://www.crystallography.net/cod/cif/7/11/25/7112564.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7112564 loop_ _publ_author_name 'Ongarora, Benson G.' 'Hu, Xiaoke' 'Li, Hairong' 'Fronczek, Frank R.' 'Vicente, M Gra\,ca H' _publ_section_title ; Syntheses and properties of trimethylaminophenoxy-substituted Zn((II))-phthalocyanines. ; _journal_issue 2 _journal_name_full MedChemComm _journal_page_first 179 _journal_page_last 194 _journal_paper_doi 10.1039/C1MD00232E _journal_volume 3 _journal_year 2012 _chemical_formula_moiety 'C19 H17 N3 O3' _chemical_formula_sum 'C19 H17 N3 O3' _chemical_formula_weight 335.36 _chemical_name_systematic ; ? ; _space_group_IT_number 29 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall 'P 2c -2ac' _symmetry_space_group_name_H-M 'P c a 21' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90 _cell_angle_beta 90 _cell_angle_gamma 90 _cell_formula_units_Z 4 _cell_length_a 10.139(2) _cell_length_b 8.597(2) _cell_length_c 20.157(5) _cell_measurement_reflns_used 5696 _cell_measurement_temperature 90.0(5) _cell_measurement_theta_max 67.8 _cell_measurement_theta_min 4.3 _cell_volume 1757.0(7) _computing_cell_refinement 'Bruker Apex2' _computing_data_collection 'Bruker Apex2' _computing_data_reduction 'Bruker Apex2' _computing_molecular_graphics 'ORTEP-3 for Windows (Farrugia, 1997)' _computing_publication_material 'Bruker SHELXTL' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 2008)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 2008)' _diffrn_ambient_temperature 90.0(5) _diffrn_measured_fraction_theta_full 0.966 _diffrn_measured_fraction_theta_max 0.953 _diffrn_measurement_device_type 'Bruker Kappa Apex-II CCD area detector' _diffrn_measurement_method 'phi and omega scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type CuK\a _diffrn_radiation_wavelength 1.54178 _diffrn_reflns_av_R_equivalents 0.039 _diffrn_reflns_av_sigmaI/netI 0.0318 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min -11 _diffrn_reflns_limit_k_max 9 _diffrn_reflns_limit_k_min -10 _diffrn_reflns_limit_l_max 18 _diffrn_reflns_limit_l_min -22 _diffrn_reflns_number 8771 _diffrn_reflns_theta_full 66.6 _diffrn_reflns_theta_max 68.1 _diffrn_reflns_theta_min 5.1 _exptl_absorpt_coefficient_mu 0.717 _exptl_absorpt_correction_T_max 0.864 _exptl_absorpt_correction_T_min 0.814 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details 'SADABS (Sheldrick, 2002)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.268 _exptl_crystal_density_method 'not measured' _exptl_crystal_description fragment _exptl_crystal_F_000 704 _exptl_crystal_size_max 0.30 _exptl_crystal_size_mid 0.28 _exptl_crystal_size_min 0.21 _refine_diff_density_max 0.19 _refine_diff_density_min -0.15 _refine_diff_density_rms 0.033 _refine_ls_abs_structure_details '935 Friedel pairs (Flack, 1983) ' _refine_ls_abs_structure_Flack 0.0(2) _refine_ls_extinction_coef 0.0013(3) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXL _refine_ls_goodness_of_fit_ref 1.054 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 233 _refine_ls_number_reflns 2507 _refine_ls_number_restraints 1 _refine_ls_restrained_S_all 1.054 _refine_ls_R_factor_all 0.034 _refine_ls_R_factor_gt 0.032 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0471P)^2^+0.3163P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.083 _refine_ls_wR_factor_ref 0.084 _reflns_number_gt 2403 _reflns_number_total 2507 _reflns_threshold_expression I>2\s(I) _cod_data_source_file c1md00232e.txt _cod_data_source_block 2b _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic' according to /usr/data/users/saulius/automatic-downloads/retrospective/RSC/lib/dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26. Automatic conversion script Id: cif_fix_values 2281 2013-09-26 08:29:07Z andrius ; _cod_original_sg_symbol_H-M 'P c a 21 ' _cod_database_code 7112564 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, z+1/2' 'x+1/2, -y, z' '-x+1/2, y, z+1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags O1 O 0.35271(12) 0.07556(17) 0.42679(8) 0.0295(3) Uani 1 1 d . O2 O 0.85512(13) 0.38705(17) 0.58253(8) 0.0337(4) Uani 1 1 d . O3 O 0.88125(12) 0.28762(16) 0.68698(7) 0.0293(3) Uani 1 1 d . N1 N -0.11108(16) 0.0872(2) 0.26012(10) 0.0320(4) Uani 1 1 d . N2 N -0.23441(17) 0.4197(2) 0.37730(10) 0.0366(5) Uani 1 1 d . N3 N 0.71161(15) 0.20932(19) 0.62817(9) 0.0237(4) Uani 1 1 d . H3N H 0.699(2) 0.159(3) 0.6673(13) 0.028 Uiso 1 1 d . C1 C 0.23275(18) 0.1483(2) 0.42261(10) 0.0248(4) Uani 1 1 d . C2 C 0.15681(18) 0.1017(2) 0.36862(11) 0.0251(4) Uani 1 1 d . H2 H 0.1877 0.0237 0.3391 0.030 Uiso 1 1 calc R C3 C 0.03457(19) 0.1719(2) 0.35872(11) 0.0250(4) Uani 1 1 d . C4 C -0.01104(18) 0.2865(2) 0.40270(11) 0.0264(4) Uani 1 1 d . C5 C 0.06562(19) 0.3278(2) 0.45692(11) 0.0278(4) Uani 1 1 d . H5 H 0.0340 0.4033 0.4874 0.033 Uiso 1 1 calc R C6 C 0.18818(19) 0.2596(2) 0.46693(11) 0.0274(5) Uani 1 1 d . H6 H 0.2409 0.2890 0.5038 0.033 Uiso 1 1 calc R C7 C -0.04587(18) 0.1246(2) 0.30355(11) 0.0260(4) Uani 1 1 d . C8 C -0.13598(19) 0.3601(2) 0.38956(11) 0.0290(4) Uani 1 1 d . C9 C 0.43813(18) 0.1181(2) 0.47865(11) 0.0265(4) Uani 1 1 d . C10 C 0.5370(2) 0.2231(2) 0.46590(11) 0.0290(5) Uani 1 1 d . H10 H 0.5428 0.2718 0.4237 0.035 Uiso 1 1 calc R C11 C 0.62872(18) 0.2580(2) 0.51513(11) 0.0277(4) Uani 1 1 d . H11 H 0.6966 0.3316 0.5067 0.033 Uiso 1 1 calc R C12 C 0.62094(17) 0.1853(2) 0.57655(10) 0.0227(4) Uani 1 1 d . C13 C 0.51863(19) 0.0797(2) 0.58876(12) 0.0290(4) Uani 1 1 d . H13 H 0.5113 0.0314 0.6310 0.035 Uiso 1 1 calc R C14 C 0.42781(19) 0.0454(2) 0.53930(11) 0.0298(5) Uani 1 1 d . H14 H 0.3592 -0.0276 0.5472 0.036 Uiso 1 1 calc R C15 C 0.82038(18) 0.3046(2) 0.62777(11) 0.0245(4) Uani 1 1 d . C16 C 1.0009(2) 0.3780(2) 0.70288(12) 0.0297(5) Uani 1 1 d . C17 C 1.0335(2) 0.3216(3) 0.77200(13) 0.0413(6) Uani 1 1 d . H17A H 0.9589 0.3426 0.8016 0.062 Uiso 1 1 calc R H17B H 1.1119 0.3761 0.7883 0.062 Uiso 1 1 calc R H17C H 1.0507 0.2094 0.7709 0.062 Uiso 1 1 calc R C18 C 0.9695(2) 0.5493(2) 0.70392(13) 0.0390(6) Uani 1 1 d . H18A H 0.9486 0.5844 0.6589 0.059 Uiso 1 1 calc R H18B H 1.0460 0.6071 0.7206 0.059 Uiso 1 1 calc R H18C H 0.8936 0.5679 0.7329 0.059 Uiso 1 1 calc R C19 C 1.1096(2) 0.3397(3) 0.65413(15) 0.0504(7) Uani 1 1 d . H19A H 1.1204 0.2266 0.6515 0.076 Uiso 1 1 calc R H19B H 1.1923 0.3872 0.6690 0.076 Uiso 1 1 calc R H19C H 1.0863 0.3805 0.6103 0.076 Uiso 1 1 calc R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 O1 0.0210(6) 0.0391(8) 0.0286(9) -0.0081(6) -0.0067(6) 0.0054(5) O2 0.0272(7) 0.0465(9) 0.0273(9) 0.0020(7) 0.0013(7) -0.0131(6) O3 0.0231(7) 0.0339(8) 0.0308(9) 0.0002(6) -0.0059(6) -0.0090(5) N1 0.0298(9) 0.0361(10) 0.0300(12) 0.0043(7) -0.0045(9) -0.0001(7) N2 0.0284(9) 0.0447(10) 0.0367(13) 0.0052(8) 0.0040(8) 0.0072(8) N3 0.0191(8) 0.0312(8) 0.0206(10) 0.0012(7) 0.0010(7) -0.0042(6) C1 0.0198(9) 0.0288(9) 0.0258(12) 0.0003(8) 0.0005(8) -0.0011(7) C2 0.0211(9) 0.0294(9) 0.0248(12) -0.0021(8) 0.0006(8) -0.0007(7) C3 0.0241(9) 0.0274(9) 0.0234(12) 0.0048(8) -0.0009(8) -0.0043(7) C4 0.0216(9) 0.0315(10) 0.0261(12) 0.0043(8) 0.0028(8) 0.0001(7) C5 0.0264(10) 0.0308(10) 0.0262(12) -0.0017(8) 0.0037(9) -0.0004(7) C6 0.0274(10) 0.0302(10) 0.0247(13) -0.0016(8) 0.0000(8) -0.0024(8) C7 0.0219(9) 0.0291(10) 0.0270(12) 0.0037(8) 0.0012(9) 0.0013(7) C8 0.0275(10) 0.0316(10) 0.0279(12) 0.0027(9) 0.0045(9) -0.0011(8) C9 0.0218(9) 0.0336(10) 0.0240(12) -0.0053(8) -0.0030(8) 0.0022(8) C10 0.0265(10) 0.0378(11) 0.0228(13) 0.0017(8) 0.0004(9) -0.0010(8) C11 0.0224(9) 0.0355(11) 0.0252(12) 0.0028(8) 0.0022(8) -0.0041(8) C12 0.0186(8) 0.0294(10) 0.0201(12) -0.0030(7) 0.0016(8) 0.0014(6) C13 0.0275(9) 0.0342(10) 0.0252(12) 0.0039(9) -0.0024(8) -0.0068(8) C14 0.0234(10) 0.0356(11) 0.0303(13) 0.0005(8) -0.0017(9) -0.0062(8) C15 0.0191(9) 0.0296(10) 0.0248(12) -0.0032(8) 0.0017(8) -0.0030(7) C16 0.0226(9) 0.0342(10) 0.0325(13) -0.0050(9) -0.0037(9) -0.0072(8) C17 0.0407(13) 0.0403(12) 0.0429(16) 0.0041(10) -0.0182(12) -0.0106(9) C18 0.0362(12) 0.0336(11) 0.0472(16) -0.0022(10) -0.0088(10) -0.0081(8) C19 0.0242(11) 0.0775(18) 0.0495(19) -0.0241(15) 0.0004(12) -0.0039(10) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0181 0.0091 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0311 0.0180 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0492 0.0322 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C1 O1 C9 118.28(15) C15 O3 C16 120.68(16) C15 N3 C12 127.52(17) C15 N3 H3N 113.7(14) C12 N3 H3N 118.8(14) O1 C1 C6 124.44(19) O1 C1 C2 114.05(17) C6 C1 C2 121.51(18) C1 C2 C3 118.67(18) C1 C2 H2 120.7 C3 C2 H2 120.7 C2 C3 C4 120.43(19) C2 C3 C7 119.55(18) C4 C3 C7 120.01(17) C5 C4 C3 119.50(18) C5 C4 C8 121.69(19) C3 C4 C8 118.80(19) C4 C5 C6 120.53(19) C4 C5 H5 119.7 C6 C5 H5 119.7 C1 C6 C5 119.34(19) C1 C6 H6 120.3 C5 C6 H6 120.3 N1 C7 C3 179.2(2) N2 C8 C4 178.1(2) C10 C9 C14 121.33(19) C10 C9 O1 118.78(19) C14 C9 O1 119.69(17) C9 C10 C11 119.72(19) C9 C10 H10 120.1 C11 C10 H10 120.1 C12 C11 C10 120.00(18) C12 C11 H11 120.0 C10 C11 H11 120.0 C11 C12 C13 119.37(18) C11 C12 N3 123.86(17) C13 C12 N3 116.76(18) C14 C13 C12 120.2(2) C14 C13 H13 119.9 C12 C13 H13 119.9 C9 C14 C13 119.38(19) C9 C14 H14 120.3 C13 C14 H14 120.3 O2 C15 O3 126.66(17) O2 C15 N3 126.07(18) O3 C15 N3 107.27(16) O3 C16 C18 110.12(16) O3 C16 C17 102.16(17) C18 C16 C17 110.30(19) O3 C16 C19 110.05(17) C18 C16 C19 112.1(2) C17 C16 C19 111.7(2) C16 C17 H17A 109.5 C16 C17 H17B 109.5 H17A C17 H17B 109.5 C16 C17 H17C 109.5 H17A C17 H17C 109.5 H17B C17 H17C 109.5 C16 C18 H18A 109.5 C16 C18 H18B 109.5 H18A C18 H18B 109.5 C16 C18 H18C 109.5 H18A C18 H18C 109.5 H18B C18 H18C 109.5 C16 C19 H19A 109.5 C16 C19 H19B 109.5 H19A C19 H19B 109.5 C16 C19 H19C 109.5 H19A C19 H19C 109.5 H19B C19 H19C 109.5 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance O1 C1 1.370(2) O1 C9 1.406(2) O2 C15 1.207(3) O3 C15 1.352(3) O3 C16 1.476(2) N1 C7 1.143(3) N2 C8 1.149(3) N3 C15 1.374(2) N3 C12 1.404(2) N3 H3N 0.91(3) C1 C6 1.384(3) C1 C2 1.392(3) C2 C3 1.393(3) C2 H2 0.9500 C3 C4 1.404(3) C3 C7 1.438(3) C4 C5 1.387(3) C4 C8 1.441(3) C5 C6 1.389(3) C5 H5 0.9500 C6 H6 0.9500 C9 C10 1.374(3) C9 C14 1.377(3) C10 C11 1.393(3) C10 H10 0.9500 C11 C12 1.389(3) C11 H11 0.9500 C12 C13 1.400(3) C13 C14 1.389(3) C13 H13 0.9500 C14 H14 0.9500 C16 C18 1.507(3) C16 C17 1.512(3) C16 C19 1.512(3) C17 H17A 0.9800 C17 H17B 0.9800 C17 H17C 0.9800 C18 H18A 0.9800 C18 H18B 0.9800 C18 H18C 0.9800 C19 H19A 0.9800 C19 H19B 0.9800 C19 H19C 0.9800 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A N3 H3N N1 0.91(3) 2.16(3) 3.036(3) 161(2) 4 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C9 O1 C1 C6 -1.3(3) C9 O1 C1 C2 178.24(18) O1 C1 C2 C3 -178.20(17) C6 C1 C2 C3 1.4(3) C1 C2 C3 C4 -0.4(3) C1 C2 C3 C7 -179.51(18) C2 C3 C4 C5 -1.1(3) C7 C3 C4 C5 178.01(18) C2 C3 C4 C8 177.94(18) C7 C3 C4 C8 -3.0(3) C3 C4 C5 C6 1.7(3) C8 C4 C5 C6 -177.31(18) O1 C1 C6 C5 178.72(18) C2 C1 C6 C5 -0.8(3) C4 C5 C6 C1 -0.8(3) C1 O1 C9 C10 -98.0(2) C1 O1 C9 C14 87.0(2) C14 C9 C10 C11 -0.3(3) O1 C9 C10 C11 -175.19(17) C9 C10 C11 C12 0.8(3) C10 C11 C12 C13 -1.4(3) C10 C11 C12 N3 177.73(18) C15 N3 C12 C11 -0.1(3) C15 N3 C12 C13 179.01(18) C11 C12 C13 C14 1.6(3) N3 C12 C13 C14 -177.62(18) C10 C9 C14 C13 0.4(3) O1 C9 C14 C13 175.31(17) C12 C13 C14 C9 -1.1(3) C16 O3 C15 O2 1.9(3) C16 O3 C15 N3 -178.58(16) C12 N3 C15 O2 1.5(3) C12 N3 C15 O3 -178.00(16) C15 O3 C16 C18 63.1(2) C15 O3 C16 C17 -179.70(17) C15 O3 C16 C19 -60.9(2)