#------------------------------------------------------------------------------ #$Date: 2013-02-27 12:57:01 +0100 (Wed, 27 Feb 2013) $ #$Revision: 74532 $ #$URL: svn://www.crystallography.net/cod/cif/7/10/89/7108954.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7108954 loop_ _publ_author_name 'Sidonie B. L. Vollrath' 'Chunhua Hu' 'Stefan Brase' 'Kent Kirshenbaum' _publ_section_title ; Peptoid nanotubes: an oligomer macrocycle that reversibly sequesters water via single-crystal-to-single-crystal transformations ; _journal_name_full Chem.Commun. _journal_page_first 2317 _journal_volume 49 _journal_year 2013 _chemical_formula_sum 'C52 H56 N8 O10' _chemical_formula_weight 953.05 _chemical_name_systematic ; ? ; _space_group_IT_number 15 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-C 2yc' _symmetry_space_group_name_H-M 'C 1 2/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 106.8840(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 26.328(2) _cell_length_b 8.8744(7) _cell_length_c 22.0441(17) _cell_measurement_reflns_used 9992 _cell_measurement_temperature 295(2) _cell_measurement_theta_max 25.89 _cell_measurement_theta_min 2.43 _cell_volume 4928.5(7) _computing_cell_refinement 'Bruker SAINT' _computing_data_collection 'Bruker APEX2' _computing_data_reduction 'Bruker SAINT' _computing_molecular_graphics 'Bruker SHELXTL' _computing_publication_material 'Bruker SHELXTL' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 2008)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 2008)' _diffrn_ambient_temperature 295(2) _diffrn_measured_fraction_theta_full 0.998 _diffrn_measured_fraction_theta_max 0.998 _diffrn_measurement_device_type 'Bruker APEX-II CCD' _diffrn_measurement_method '\f and \w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0358 _diffrn_reflns_av_sigmaI/netI 0.0168 _diffrn_reflns_limit_h_max 34 _diffrn_reflns_limit_h_min -34 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -11 _diffrn_reflns_limit_l_max 28 _diffrn_reflns_limit_l_min -28 _diffrn_reflns_number 64702 _diffrn_reflns_theta_full 27.55 _diffrn_reflns_theta_max 27.55 _diffrn_reflns_theta_min 1.62 _exptl_absorpt_coefficient_mu 0.090 _exptl_absorpt_correction_T_max 0.9853 _exptl_absorpt_correction_T_min 0.9521 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details SADABS _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.284 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 2016 _exptl_crystal_size_max 0.55 _exptl_crystal_size_mid 0.54 _exptl_crystal_size_min 0.16 _refine_diff_density_max 0.495 _refine_diff_density_min -0.292 _refine_diff_density_rms 0.033 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.033 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 317 _refine_ls_number_reflns 5681 _refine_ls_number_restraints 1 _refine_ls_restrained_S_all 1.034 _refine_ls_R_factor_all 0.0625 _refine_ls_R_factor_gt 0.0451 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0531P)^2^+3.0347P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1157 _refine_ls_wR_factor_ref 0.1287 _reflns_number_gt 4293 _reflns_number_total 5681 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file c3cc37163h.txt _[local]_cod_data_source_block 10ktk12h _[local]_cod_cif_authors_sg_H-M 'C2/c ' _cod_original_cell_volume 4928.6(7) _cod_database_code 7108954 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y, -z+1/2' 'x+1/2, y+1/2, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y, z-1/2' '-x+1/2, -y+1/2, -z' 'x+1/2, -y+1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags O1 O 0.14140(5) 0.12912(13) 0.26757(6) 0.0586(3) Uani 1 1 d . O2 O 0.14402(6) 0.28505(18) 0.11150(6) 0.0787(4) Uani 1 1 d . O3 O 0.32397(5) 0.17293(15) 0.19493(8) 0.0756(4) Uani 1 1 d . O4 O -0.01104(4) 0.40022(14) 0.06517(5) 0.0564(3) Uani 1 1 d . O5 O 0.06943(4) 0.36724(13) 0.32089(6) 0.0546(3) Uani 1 1 d . N1 N 0.16804(5) 0.24155(15) 0.36297(6) 0.0472(3) Uani 1 1 d . N2 N 0.19846(5) 0.30193(15) 0.21136(6) 0.0449(3) Uani 1 1 d . N3 N 0.06868(5) 0.47165(15) 0.13004(6) 0.0456(3) Uani 1 1 d . N4 N -0.02870(5) 0.18096(14) 0.14147(6) 0.0420(3) Uani 1 1 d . C1 C 0.16931(6) 0.22230(16) 0.30248(8) 0.0438(3) Uani 1 1 d . C2 C 0.12452(6) 0.1678(2) 0.37937(8) 0.0510(4) Uani 1 1 d . H2A H 0.1319 0.1662 0.4251 0.061 Uiso 1 1 calc R H2B H 0.1217 0.0644 0.3646 0.061 Uiso 1 1 calc R C3 C 0.20016(7) 0.3458(2) 0.40732(8) 0.0529(4) Uani 1 1 d . C4 C 0.17673(9) 0.4478(2) 0.43835(10) 0.0729(5) Uani 1 1 d . H4 H 0.1400 0.4519 0.4289 0.087 Uiso 1 1 calc R C5 C 0.20779(13) 0.5432(3) 0.48321(12) 0.0974(8) Uani 1 1 d . H5 H 0.1920 0.6093 0.5051 0.117 Uiso 1 1 calc R C6 C 0.26202(14) 0.5410(3) 0.49575(12) 0.1031(10) Uani 1 1 d . H6 H 0.2828 0.6079 0.5251 0.124 Uiso 1 1 calc R C7 C 0.28568(10) 0.4408(3) 0.46519(10) 0.0868(8) Uani 1 1 d . H7 H 0.3224 0.4413 0.4733 0.104 Uiso 1 1 calc R C8 C 0.25512(7) 0.3385(2) 0.42225(9) 0.0647(5) Uani 1 1 d . H8 H 0.2713 0.2659 0.4037 0.078 Uiso 1 1 calc R C9 C 0.20353(6) 0.33042(17) 0.27743(7) 0.0430(3) Uani 1 1 d . H9A H 0.1929 0.4333 0.2823 0.052 Uiso 1 1 calc R H9B H 0.2404 0.3191 0.3021 0.052 Uiso 1 1 calc R C10 C 0.15308(6) 0.33332(18) 0.16533(8) 0.0473(4) Uani 1 1 d . C11 C 0.23644(7) 0.19657(19) 0.19853(9) 0.0560(4) Uani 1 1 d . H11A H 0.2198 0.1421 0.1597 0.067 Uiso 1 1 calc R H11B H 0.2470 0.1239 0.2328 0.067 Uiso 1 1 calc R C12 C 0.28505(7) 0.2784(2) 0.19214(11) 0.0639(5) Uani 1 1 d . H12A H 0.2766 0.3319 0.1521 0.077 Uiso 1 1 calc R H12B H 0.2972 0.3510 0.2262 0.077 Uiso 1 1 calc R C13 C 0.37040(9) 0.2330(3) 0.18486(14) 0.0875(7) Uani 1 1 d . H13A H 0.3619 0.2781 0.1435 0.131 Uiso 1 1 calc R H13B H 0.3958 0.1538 0.1877 0.131 Uiso 1 1 calc R H13C H 0.3851 0.3080 0.2165 0.131 Uiso 1 1 calc R C14 C 0.11429(5) 0.43918(17) 0.18351(7) 0.0419(3) Uani 1 1 d . H14A H 0.1025 0.3935 0.2170 0.050 Uiso 1 1 calc R H14B H 0.1323 0.5326 0.1997 0.050 Uiso 1 1 calc R C15 C 0.02493(6) 0.38264(17) 0.11392(7) 0.0419(3) Uani 1 1 d . C16 C 0.07733(7) 0.5791(2) 0.08335(8) 0.0586(4) Uani 1 1 d . H16A H 0.1023 0.5361 0.0633 0.070 Uiso 1 1 calc R H16B H 0.0440 0.5957 0.0507 0.070 Uiso 1 1 calc R C17 C 0.09785(8) 0.7234(2) 0.11199(10) 0.0675(5) Uani 1 1 d . C18 C 0.11507(10) 0.8383(3) 0.13474(14) 0.0978(8) Uani 1 1 d . H18 H 0.1288 0.9298 0.1529 0.117 Uiso 1 1 calc R C19 C 0.02173(6) 0.25991(17) 0.16138(7) 0.0428(3) Uani 1 1 d . H19A H 0.0504 0.1885 0.1654 0.051 Uiso 1 1 calc R H19B H 0.0261 0.3052 0.2026 0.051 Uiso 1 1 calc R C20 C -0.03345(6) 0.03959(17) 0.10799(8) 0.0447(3) Uani 1 1 d . C21 C -0.05034(7) 0.0366(2) 0.04285(9) 0.0592(4) Uani 1 1 d . H21 H -0.0555 0.1260 0.0199 0.071 Uiso 1 1 calc R C22 C -0.05966(9) -0.1005(3) 0.01169(11) 0.0777(6) Uani 1 1 d . H22 H -0.0717 -0.1029 -0.0324 0.093 Uiso 1 1 calc R C23 C -0.05141(9) -0.2310(3) 0.04480(14) 0.0835(7) Uani 1 1 d U H23 H -0.0583 -0.3225 0.0234 0.100 Uiso 1 1 calc R C24 C -0.03309(10) -0.2296(2) 0.10944(14) 0.0806(6) Uani 1 1 d U H24 H -0.0268 -0.3198 0.1318 0.097 Uiso 1 1 calc R C25 C -0.02381(8) -0.0925(2) 0.14188(10) 0.0626(5) Uani 1 1 d . H25 H -0.0113 -0.0907 0.1859 0.075 Uiso 1 1 calc R C26 C 0.07183(6) 0.24888(17) 0.34988(7) 0.0422(3) Uani 1 1 d . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 O1 0.0554(7) 0.0440(6) 0.0727(8) -0.0016(6) 0.0128(6) -0.0133(5) O2 0.0737(9) 0.0978(11) 0.0580(8) -0.0294(7) 0.0088(6) 0.0156(8) O3 0.0558(7) 0.0543(7) 0.1280(12) 0.0196(8) 0.0447(8) 0.0078(6) O4 0.0487(6) 0.0635(7) 0.0463(6) 0.0054(5) -0.0028(5) -0.0063(5) O5 0.0483(6) 0.0504(6) 0.0625(7) 0.0215(5) 0.0119(5) 0.0010(5) N1 0.0347(6) 0.0500(7) 0.0555(8) 0.0104(6) 0.0110(5) -0.0038(5) N2 0.0354(6) 0.0463(7) 0.0536(7) -0.0025(6) 0.0141(5) 0.0043(5) N3 0.0369(6) 0.0487(7) 0.0463(7) 0.0066(6) 0.0042(5) -0.0018(5) N4 0.0357(6) 0.0423(7) 0.0478(7) -0.0074(5) 0.0120(5) -0.0019(5) C1 0.0332(7) 0.0356(7) 0.0595(9) 0.0069(7) 0.0087(6) 0.0024(6) C2 0.0379(8) 0.0533(9) 0.0615(10) 0.0202(8) 0.0139(7) 0.0004(7) C3 0.0487(9) 0.0564(10) 0.0487(9) 0.0128(7) 0.0064(7) -0.0057(7) C4 0.0769(13) 0.0701(13) 0.0666(12) -0.0011(10) 0.0129(10) 0.0002(11) C5 0.128(2) 0.0795(16) 0.0738(15) -0.0105(13) 0.0119(15) -0.0080(16) C6 0.124(2) 0.0928(19) 0.0687(15) -0.0003(14) -0.0092(15) -0.0384(18) C7 0.0705(14) 0.112(2) 0.0591(12) 0.0230(13) -0.0102(10) -0.0317(14) C8 0.0488(10) 0.0836(13) 0.0533(10) 0.0180(9) 0.0018(8) -0.0101(9) C9 0.0329(7) 0.0430(8) 0.0514(8) 0.0030(6) 0.0096(6) -0.0018(6) C10 0.0414(8) 0.0473(8) 0.0523(9) -0.0071(7) 0.0124(7) -0.0005(7) C11 0.0495(9) 0.0483(9) 0.0761(12) -0.0008(8) 0.0274(8) 0.0095(7) C12 0.0577(10) 0.0515(10) 0.0941(14) 0.0131(9) 0.0403(10) 0.0105(8) C13 0.0602(12) 0.0695(13) 0.148(2) 0.0162(14) 0.0541(14) 0.0030(10) C14 0.0340(7) 0.0429(8) 0.0452(8) -0.0026(6) 0.0059(6) -0.0002(6) C15 0.0380(7) 0.0444(8) 0.0411(7) -0.0037(6) 0.0082(6) 0.0013(6) C16 0.0515(9) 0.0644(11) 0.0571(10) 0.0137(8) 0.0115(8) -0.0054(8) C17 0.0532(10) 0.0629(12) 0.0811(13) 0.0210(10) 0.0108(9) -0.0070(9) C18 0.0807(16) 0.0639(14) 0.135(2) 0.0150(14) 0.0093(15) -0.0180(12) C19 0.0343(7) 0.0476(8) 0.0434(8) -0.0009(6) 0.0062(6) -0.0013(6) C20 0.0371(7) 0.0442(8) 0.0565(9) -0.0097(7) 0.0194(7) -0.0008(6) C21 0.0606(10) 0.0632(11) 0.0562(10) -0.0150(8) 0.0209(8) -0.0021(8) C22 0.0746(13) 0.0850(16) 0.0772(14) -0.0391(12) 0.0279(11) -0.0071(12) C23 0.0769(14) 0.0653(14) 0.1216(18) -0.0429(14) 0.0497(14) -0.0109(11) C24 0.0848(15) 0.0458(10) 0.1282(19) -0.0036(12) 0.0575(14) 0.0058(10) C25 0.0673(11) 0.0525(10) 0.0754(12) 0.0003(9) 0.0326(10) 0.0091(9) C26 0.0384(7) 0.0444(8) 0.0424(7) 0.0077(6) 0.0095(6) 0.0000(6) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 C12 O3 C13 113.86(15) . . C1 N1 C3 125.14(13) . . C1 N1 C2 115.77(13) . . C3 N1 C2 118.27(14) . . C10 N2 C9 121.51(12) . . C10 N2 C11 119.56(14) . . C9 N2 C11 116.14(13) . . C15 N3 C14 122.57(13) . . C15 N3 C16 119.17(13) . . C14 N3 C16 116.07(12) . . C26 N4 C20 120.67(12) 2 . C26 N4 C19 118.41(12) 2 . C20 N4 C19 120.67(12) . . O1 C1 N1 121.59(14) . . O1 C1 C9 120.62(15) . . N1 C1 C9 117.59(13) . . N1 C2 C26 111.45(12) . . N1 C2 H2A 109.3 . . C26 C2 H2A 109.3 . . N1 C2 H2B 109.3 . . C26 C2 H2B 109.3 . . H2A C2 H2B 108.0 . . C4 C3 C8 119.78(19) . . C4 C3 N1 120.06(16) . . C8 C3 N1 120.03(18) . . C5 C4 C3 120.0(2) . . C5 C4 H4 120.0 . . C3 C4 H4 120.0 . . C6 C5 C4 120.1(3) . . C6 C5 H5 119.9 . . C4 C5 H5 119.9 . . C7 C6 C5 120.3(2) . . C7 C6 H6 119.8 . . C5 C6 H6 119.8 . . C6 C7 C8 120.3(2) . . C6 C7 H7 119.9 . . C8 C7 H7 119.9 . . C7 C8 C3 119.3(2) . . C7 C8 H8 120.4 . . C3 C8 H8 120.4 . . N2 C9 C1 111.30(12) . . N2 C9 H9A 109.4 . . C1 C9 H9A 109.4 . . N2 C9 H9B 109.4 . . C1 C9 H9B 109.4 . . H9A C9 H9B 108.0 . . O2 C10 N2 122.60(15) . . O2 C10 C14 121.08(14) . . N2 C10 C14 116.27(13) . . N2 C11 C12 110.94(14) . . N2 C11 H11A 109.5 . . C12 C11 H11A 109.5 . . N2 C11 H11B 109.5 . . C12 C11 H11B 109.5 . . H11A C11 H11B 108.0 . . O3 C12 C11 107.98(14) . . O3 C12 H12A 110.1 . . C11 C12 H12A 110.1 . . O3 C12 H12B 110.1 . . C11 C12 H12B 110.1 . . H12A C12 H12B 108.4 . . O3 C13 H13A 109.5 . . O3 C13 H13B 109.5 . . H13A C13 H13B 109.5 . . O3 C13 H13C 109.5 . . H13A C13 H13C 109.5 . . H13B C13 H13C 109.5 . . N3 C14 C10 111.68(12) . . N3 C14 H14A 109.3 . . C10 C14 H14A 109.3 . . N3 C14 H14B 109.3 . . C10 C14 H14B 109.3 . . H14A C14 H14B 107.9 . . O4 C15 N3 122.67(14) . . O4 C15 C19 120.75(13) . . N3 C15 C19 116.55(12) . . C17 C16 N3 112.31(15) . . C17 C16 H16A 109.1 . . N3 C16 H16A 109.1 . . C17 C16 H16B 109.1 . . N3 C16 H16B 109.1 . . H16A C16 H16B 107.9 . . C18 C17 C16 178.9(3) . . C17 C18 H18 180.0 . . N4 C19 C15 111.36(12) . . N4 C19 H19A 109.4 . . C15 C19 H19A 109.4 . . N4 C19 H19B 109.4 . . C15 C19 H19B 109.4 . . H19A C19 H19B 108.0 . . C25 C20 C21 120.27(16) . . C25 C20 N4 119.29(15) . . C21 C20 N4 120.34(15) . . C20 C21 C22 119.5(2) . . C20 C21 H21 120.2 . . C22 C21 H21 120.2 . . C23 C22 C21 120.5(2) . . C23 C22 H22 119.8 . . C21 C22 H22 119.8 . . C22 C23 C24 120.5(2) . . C22 C23 H23 119.7 . . C24 C23 H23 119.7 . . C23 C24 C25 120.0(2) . . C23 C24 H24 120.0 . . C25 C24 H24 120.0 . . C20 C25 C24 119.2(2) . . C20 C25 H25 120.4 . . C24 C25 H25 120.4 . . O5 C26 N4 122.75(13) . 2 O5 C26 C2 121.97(13) . . N4 C26 C2 115.28(12) 2 . loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 O1 C1 1.2196(18) . O2 C10 1.2182(19) . O3 C12 1.376(2) . O3 C13 1.409(2) . O4 C15 1.2186(17) . O5 C26 1.2216(18) . N1 C1 1.355(2) . N1 C3 1.430(2) . N1 C2 1.4534(19) . N2 C10 1.353(2) . N2 C9 1.446(2) . N2 C11 1.4557(19) . N3 C15 1.3562(19) . N3 C14 1.4465(18) . N3 C16 1.468(2) . N4 C26 1.3471(18) 2 N4 C20 1.4425(19) . N4 C19 1.4520(18) . C1 C9 1.525(2) . C2 C26 1.530(2) . C2 H2A 0.9700 . C2 H2B 0.9700 . C3 C4 1.383(3) . C3 C8 1.389(2) . C4 C5 1.376(3) . C4 H4 0.9300 . C5 C6 1.374(4) . C5 H5 0.9300 . C6 C7 1.370(4) . C6 H6 0.9300 . C7 C8 1.387(3) . C7 H7 0.9300 . C8 H8 0.9300 . C9 H9A 0.9700 . C9 H9B 0.9700 . C10 C14 1.524(2) . C11 C12 1.513(2) . C11 H11A 0.9700 . C11 H11B 0.9700 . C12 H12A 0.9700 . C12 H12B 0.9700 . C13 H13A 0.9600 . C13 H13B 0.9600 . C13 H13C 0.9600 . C14 H14A 0.9700 . C14 H14B 0.9700 . C15 C19 1.529(2) . C16 C17 1.460(3) . C16 H16A 0.9700 . C16 H16B 0.9700 . C17 C18 1.168(3) . C18 H18 0.9300 . C19 H19A 0.9700 . C19 H19B 0.9700 . C20 C25 1.374(2) . C20 C21 1.375(2) . C21 C22 1.383(3) . C21 H21 0.9300 . C22 C23 1.353(3) . C22 H22 0.9300 . C23 C24 1.365(4) . C23 H23 0.9300 . C24 C25 1.396(3) . C24 H24 0.9300 . C25 H25 0.9300 . C26 N4 1.3471(18) 2