#------------------------------------------------------------------------------ #$Date: 2013-02-27 12:57:01 +0100 (Wed, 27 Feb 2013) $ #$Revision: 74532 $ #$URL: svn://www.crystallography.net/cod/cif/7/10/89/7108953.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7108953 loop_ _publ_author_name 'Sidonie B. L. Vollrath' 'Chunhua Hu' 'Stefan Brase' 'Kent Kirshenbaum' _publ_section_title ; Peptoid nanotubes: an oligomer macrocycle that reversibly sequesters water via single-crystal-to-single-crystal transformations ; _journal_name_full Chem.Commun. _journal_page_first 2317 _journal_volume 49 _journal_year 2013 _chemical_formula_sum 'C52 H56.39 N8 O10.19' _chemical_formula_weight 956.52 _chemical_name_systematic ; ? ; _space_group_IT_number 15 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-C 2yc' _symmetry_space_group_name_H-M 'C 1 2/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 106.8540(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 26.2161(19) _cell_length_b 8.8142(6) _cell_length_c 21.7727(16) _cell_measurement_reflns_used 9825 _cell_measurement_temperature 100(2) _cell_measurement_theta_max 28.27 _cell_measurement_theta_min 2.45 _cell_volume 4815.0(6) _computing_cell_refinement 'Bruker SAINT' _computing_data_collection 'Bruker APEX2' _computing_data_reduction 'Bruker SAINT' _computing_molecular_graphics 'Bruker SHELXTL' _computing_publication_material 'Bruker SHELXTL' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 2008)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 2008)' _diffrn_ambient_temperature 100(2) _diffrn_measured_fraction_theta_full 0.999 _diffrn_measured_fraction_theta_max 0.999 _diffrn_measurement_device_type 'Bruker APEX-II CCD' _diffrn_measurement_method '\f and \w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0401 _diffrn_reflns_av_sigmaI/netI 0.0166 _diffrn_reflns_limit_h_max 34 _diffrn_reflns_limit_h_min -34 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -11 _diffrn_reflns_limit_l_max 29 _diffrn_reflns_limit_l_min -29 _diffrn_reflns_number 75014 _diffrn_reflns_theta_full 28.31 _diffrn_reflns_theta_max 28.31 _diffrn_reflns_theta_min 1.62 _exptl_absorpt_coefficient_mu 0.093 _exptl_absorpt_correction_T_max 0.9849 _exptl_absorpt_correction_T_min 0.9507 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details SADABS _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.319 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 2024 _exptl_crystal_size_max 0.55 _exptl_crystal_size_mid 0.54 _exptl_crystal_size_min 0.16 _refine_diff_density_max 0.367 _refine_diff_density_min -0.181 _refine_diff_density_rms 0.041 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.045 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 327 _refine_ls_number_reflns 5992 _refine_ls_number_restraints 1 _refine_ls_restrained_S_all 1.046 _refine_ls_R_factor_all 0.0416 _refine_ls_R_factor_gt 0.0367 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0488P)^2^+3.4506P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0952 _refine_ls_wR_factor_ref 0.0991 _reflns_number_gt 5309 _reflns_number_total 5992 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file c3cc37163h.txt _[local]_cod_data_source_block 10ktk11h _[local]_cod_cif_authors_sg_H-M 'C2/c ' _cod_database_code 7108953 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y, -z+1/2' 'x+1/2, y+1/2, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y, z-1/2' '-x+1/2, -y+1/2, -z' 'x+1/2, -y+1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags O1 O 0.14297(3) 0.12425(9) 0.26607(4) 0.02247(16) Uani 1 1 d . O2 O 0.14345(3) 0.29418(10) 0.10846(4) 0.02883(19) Uani 1 1 d . O3 O 0.32395(3) 0.16752(9) 0.18934(4) 0.02667(18) Uani 1 1 d . O4 O -0.01279(3) 0.40749(9) 0.06520(3) 0.02136(16) Uani 1 1 d . O5 O 0.07047(3) 0.36369(9) 0.31944(3) 0.02057(16) Uani 1 1 d . N1 N 0.16932(3) 0.23610(10) 0.36365(4) 0.01884(18) Uani 1 1 d . N2 N 0.19909(3) 0.30511(10) 0.20982(4) 0.01823(17) Uani 1 1 d . N3 N 0.06800(3) 0.47753(10) 0.13128(4) 0.01793(17) Uani 1 1 d . N4 N -0.02896(3) 0.17909(10) 0.14065(4) 0.01688(17) Uani 1 1 d . C1 C 0.17079(4) 0.21852(11) 0.30204(5) 0.01777(19) Uani 1 1 d . C2 C 0.12528(4) 0.16154(12) 0.37953(5) 0.0199(2) Uani 1 1 d . H2A H 0.1325 0.1585 0.4267 0.024 Uiso 1 1 calc R H2B H 0.1222 0.0557 0.3636 0.024 Uiso 1 1 calc R C3 C 0.20074(4) 0.34288(12) 0.40867(5) 0.0211(2) Uani 1 1 d . C4 C 0.17615(5) 0.44317(14) 0.44051(5) 0.0273(2) Uani 1 1 d . H4 H 0.1385 0.4432 0.4315 0.033 Uiso 1 1 calc R C5 C 0.20690(6) 0.54345(15) 0.48563(6) 0.0355(3) Uani 1 1 d . H5 H 0.1903 0.6096 0.5085 0.043 Uiso 1 1 calc R C6 C 0.26181(6) 0.54674(16) 0.49711(6) 0.0381(3) Uani 1 1 d . H6 H 0.2826 0.6177 0.5268 0.046 Uiso 1 1 calc R C7 C 0.28627(5) 0.44733(16) 0.46555(6) 0.0330(3) Uani 1 1 d . H7 H 0.3238 0.4515 0.4731 0.040 Uiso 1 1 calc R C8 C 0.25618(4) 0.34083(14) 0.42269(5) 0.0254(2) Uani 1 1 d . H8 H 0.2732 0.2678 0.4033 0.030 Uiso 1 1 calc R C9 C 0.20509(4) 0.33040(11) 0.27738(5) 0.01736(19) Uani 1 1 d . H9A H 0.1943 0.4356 0.2837 0.021 Uiso 1 1 calc R H9B H 0.2430 0.3178 0.3022 0.021 Uiso 1 1 calc R C10 C 0.15306(4) 0.33845(12) 0.16390(5) 0.0190(2) Uani 1 1 d . C11 C 0.23637(4) 0.19769(12) 0.19518(5) 0.0212(2) Uani 1 1 d . H11A H 0.2187 0.1439 0.1547 0.025 Uiso 1 1 calc R H11B H 0.2471 0.1213 0.2299 0.025 Uiso 1 1 calc R C12 C 0.28540(4) 0.27982(12) 0.18862(5) 0.0220(2) Uani 1 1 d . H12A H 0.2767 0.3375 0.1479 0.026 Uiso 1 1 calc R H12B H 0.2989 0.3515 0.2247 0.026 Uiso 1 1 calc R C13 C 0.37071(5) 0.22719(14) 0.17790(7) 0.0297(3) Uani 1 1 d . H13A H 0.3616 0.2718 0.1349 0.045 Uiso 1 1 calc R H13B H 0.3967 0.1455 0.1810 0.045 Uiso 1 1 calc R H13C H 0.3861 0.3054 0.2099 0.045 Uiso 1 1 calc R C14 C 0.11418(4) 0.44220(11) 0.18481(5) 0.01715(19) Uani 1 1 d . H14A H 0.1024 0.3915 0.2190 0.021 Uiso 1 1 calc R H14B H 0.1326 0.5374 0.2027 0.021 Uiso 1 1 calc R C15 C 0.02393(4) 0.38754(11) 0.11414(5) 0.01683(19) Uani 1 1 d . C16 C 0.07658(4) 0.58940(12) 0.08507(5) 0.0221(2) Uani 1 1 d U H16A H 0.0424 0.6089 0.0519 0.027 Uiso 1 1 calc R H16B H 0.1019 0.5474 0.0635 0.027 Uiso 1 1 calc R C17 C 0.09775(4) 0.73325(13) 0.11667(5) 0.0246(2) Uani 1 1 d U C18 C 0.11589(5) 0.84788(14) 0.14274(6) 0.0327(3) Uani 1 1 d . H18 H 0.1304 0.9395 0.1636 0.039 Uiso 1 1 calc R C19 C 0.02167(4) 0.25936(11) 0.16122(5) 0.01719(19) Uani 1 1 d . H19A H 0.0512 0.1871 0.1640 0.021 Uiso 1 1 calc R H19B H 0.0264 0.3026 0.2045 0.021 Uiso 1 1 calc R C20 C -0.03397(4) 0.03942(11) 0.10481(5) 0.01790(19) Uani 1 1 d . C21 C -0.05199(4) 0.04189(13) 0.03812(5) 0.0226(2) Uani 1 1 d . H21 H -0.0572 0.1357 0.0157 0.027 Uiso 1 1 calc R C22 C -0.06226(5) -0.09440(14) 0.00459(6) 0.0273(2) Uani 1 1 d . H22 H -0.0753 -0.0937 -0.0409 0.033 Uiso 1 1 calc R C23 C -0.05360(5) -0.23106(13) 0.03737(6) 0.0285(2) Uani 1 1 d . H23 H -0.0613 -0.3239 0.0143 0.034 Uiso 1 1 calc R C24 C -0.03368(5) -0.23266(13) 0.10379(6) 0.0279(2) Uani 1 1 d . H24 H -0.0267 -0.3266 0.1261 0.033 Uiso 1 1 calc R C25 C -0.02399(4) -0.09697(13) 0.13781(5) 0.0231(2) Uani 1 1 d . H25 H -0.0106 -0.0978 0.1833 0.028 Uiso 1 1 calc R C26 C 0.07250(4) 0.24509(11) 0.34961(5) 0.01685(19) Uani 1 1 d . O6 O 0.0000 0.5951(7) 0.2500 0.029(2) Uani 0.194(6) 2 d SP H6O H 0.023(3) 0.528(9) 0.273(3) 0.021(17) Uiso 0.194(6) 1 d P loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 O1 0.0212(4) 0.0179(3) 0.0271(4) -0.0015(3) 0.0051(3) -0.0032(3) O2 0.0283(4) 0.0347(5) 0.0216(4) -0.0094(3) 0.0043(3) 0.0035(3) O3 0.0209(4) 0.0200(4) 0.0440(5) 0.0057(3) 0.0171(3) 0.0035(3) O4 0.0204(4) 0.0226(4) 0.0179(3) 0.0003(3) 0.0006(3) -0.0018(3) O5 0.0204(4) 0.0194(4) 0.0211(3) 0.0058(3) 0.0047(3) 0.0004(3) N1 0.0145(4) 0.0200(4) 0.0214(4) 0.0029(3) 0.0041(3) -0.0016(3) N2 0.0154(4) 0.0196(4) 0.0205(4) -0.0028(3) 0.0065(3) 0.0009(3) N3 0.0162(4) 0.0186(4) 0.0175(4) 0.0023(3) 0.0026(3) -0.0016(3) N4 0.0156(4) 0.0166(4) 0.0185(4) -0.0032(3) 0.0049(3) -0.0021(3) C1 0.0140(4) 0.0153(4) 0.0231(5) 0.0021(4) 0.0038(4) 0.0022(3) C2 0.0157(4) 0.0202(5) 0.0234(5) 0.0068(4) 0.0052(4) 0.0005(4) C3 0.0210(5) 0.0220(5) 0.0176(5) 0.0042(4) 0.0012(4) -0.0027(4) C4 0.0295(6) 0.0272(6) 0.0232(5) 0.0011(4) 0.0046(4) 0.0001(5) C5 0.0482(8) 0.0294(6) 0.0257(6) -0.0025(5) 0.0054(5) -0.0021(5) C6 0.0479(8) 0.0336(7) 0.0240(6) 0.0002(5) -0.0035(5) -0.0150(6) C7 0.0273(6) 0.0435(7) 0.0215(5) 0.0099(5) -0.0034(4) -0.0120(5) C8 0.0218(5) 0.0315(6) 0.0200(5) 0.0074(4) 0.0016(4) -0.0030(4) C9 0.0150(4) 0.0180(5) 0.0189(4) -0.0005(4) 0.0046(4) -0.0014(3) C10 0.0178(5) 0.0178(5) 0.0218(5) -0.0033(4) 0.0062(4) -0.0024(4) C11 0.0183(5) 0.0192(5) 0.0279(5) -0.0022(4) 0.0097(4) 0.0019(4) C12 0.0199(5) 0.0198(5) 0.0290(5) 0.0025(4) 0.0112(4) 0.0030(4) C13 0.0229(5) 0.0254(6) 0.0459(7) 0.0046(5) 0.0180(5) 0.0012(4) C14 0.0148(4) 0.0184(5) 0.0171(4) -0.0016(3) 0.0027(3) -0.0004(3) C15 0.0172(4) 0.0168(4) 0.0166(4) -0.0024(3) 0.0052(4) 0.0004(4) C16 0.0222(5) 0.0238(5) 0.0202(5) 0.0039(4) 0.0057(4) -0.0029(4) C17 0.0216(5) 0.0245(5) 0.0264(5) 0.0064(4) 0.0050(4) -0.0018(4) C18 0.0293(6) 0.0238(6) 0.0403(7) 0.0040(5) 0.0025(5) -0.0041(5) C19 0.0145(4) 0.0180(5) 0.0180(4) -0.0004(4) 0.0030(3) -0.0019(3) C20 0.0155(4) 0.0174(5) 0.0222(5) -0.0043(4) 0.0078(4) -0.0013(3) C21 0.0237(5) 0.0232(5) 0.0220(5) -0.0032(4) 0.0083(4) -0.0012(4) C22 0.0264(5) 0.0309(6) 0.0258(5) -0.0103(4) 0.0093(4) -0.0024(5) C23 0.0265(6) 0.0234(5) 0.0391(6) -0.0126(5) 0.0151(5) -0.0031(4) C24 0.0298(6) 0.0184(5) 0.0405(6) -0.0012(5) 0.0179(5) 0.0020(4) C25 0.0236(5) 0.0215(5) 0.0261(5) -0.0005(4) 0.0103(4) 0.0023(4) C26 0.0166(4) 0.0178(4) 0.0156(4) 0.0008(3) 0.0039(3) 0.0004(4) O6 0.029(4) 0.022(3) 0.028(3) 0.000 -0.003(3) 0.000 loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 C12 O3 C13 112.95(8) . . C1 N1 C3 124.96(9) . . C1 N1 C2 115.71(8) . . C3 N1 C2 118.18(9) . . C10 N2 C9 121.71(8) . . C10 N2 C11 119.19(8) . . C9 N2 C11 115.98(8) . . C15 N3 C14 122.65(8) . . C15 N3 C16 119.25(8) . . C14 N3 C16 115.84(8) . . C26 N4 C20 120.23(8) 2 . C26 N4 C19 118.60(8) 2 . C20 N4 C19 120.87(8) . . O1 C1 N1 121.65(9) . . O1 C1 C9 120.84(9) . . N1 C1 C9 117.32(9) . . N1 C2 C26 111.23(8) . . N1 C2 H2A 109.4 . . C26 C2 H2A 109.4 . . N1 C2 H2B 109.4 . . C26 C2 H2B 109.4 . . H2A C2 H2B 108.0 . . C4 C3 C8 120.17(10) . . C4 C3 N1 120.00(10) . . C8 C3 N1 119.76(10) . . C5 C4 C3 119.85(12) . . C5 C4 H4 120.1 . . C3 C4 H4 120.1 . . C6 C5 C4 119.90(13) . . C6 C5 H5 120.0 . . C4 C5 H5 120.0 . . C7 C6 C5 120.27(12) . . C7 C6 H6 119.9 . . C5 C6 H6 119.9 . . C6 C7 C8 120.37(12) . . C6 C7 H7 119.8 . . C8 C7 H7 119.8 . . C7 C8 C3 119.24(12) . . C7 C8 H8 120.4 . . C3 C8 H8 120.4 . . N2 C9 C1 110.75(8) . . N2 C9 H9A 109.5 . . C1 C9 H9A 109.5 . . N2 C9 H9B 109.5 . . C1 C9 H9B 109.5 . . H9A C9 H9B 108.1 . . O2 C10 N2 122.84(10) . . O2 C10 C14 121.26(9) . . N2 C10 C14 115.84(8) . . N2 C11 C12 110.48(8) . . N2 C11 H11A 109.6 . . C12 C11 H11A 109.6 . . N2 C11 H11B 109.6 . . C12 C11 H11B 109.6 . . H11A C11 H11B 108.1 . . O3 C12 C11 106.72(8) . . O3 C12 H12A 110.4 . . C11 C12 H12A 110.4 . . O3 C12 H12B 110.4 . . C11 C12 H12B 110.4 . . H12A C12 H12B 108.6 . . O3 C13 H13A 109.5 . . O3 C13 H13B 109.5 . . H13A C13 H13B 109.5 . . O3 C13 H13C 109.5 . . H13A C13 H13C 109.5 . . H13B C13 H13C 109.5 . . N3 C14 C10 111.18(8) . . N3 C14 H14A 109.4 . . C10 C14 H14A 109.4 . . N3 C14 H14B 109.4 . . C10 C14 H14B 109.4 . . H14A C14 H14B 108.0 . . O4 C15 N3 123.07(9) . . O4 C15 C19 120.88(9) . . N3 C15 C19 116.03(8) . . N3 C16 C17 111.66(9) . . N3 C16 H16A 109.3 . . C17 C16 H16A 109.3 . . N3 C16 H16B 109.3 . . C17 C16 H16B 109.3 . . H16A C16 H16B 107.9 . . C18 C17 C16 178.56(13) . . C17 C18 H18 180.0 . . N4 C19 C15 111.09(8) . . N4 C19 H19A 109.4 . . C15 C19 H19A 109.4 . . N4 C19 H19B 109.4 . . C15 C19 H19B 109.4 . . H19A C19 H19B 108.0 . . C25 C20 C21 120.72(10) . . C25 C20 N4 119.06(9) . . C21 C20 N4 120.09(9) . . C20 C21 C22 119.34(10) . . C20 C21 H21 120.3 . . C22 C21 H21 120.3 . . C23 C22 C21 120.19(11) . . C23 C22 H22 119.9 . . C21 C22 H22 119.9 . . C22 C23 C24 120.11(10) . . C22 C23 H23 119.9 . . C24 C23 H23 119.9 . . C23 C24 C25 120.11(11) . . C23 C24 H24 119.9 . . C25 C24 H24 119.9 . . C20 C25 C24 119.46(10) . . C20 C25 H25 120.3 . . C24 C25 H25 120.3 . . O5 C26 N4 122.89(9) . 2 O5 C26 C2 121.95(9) . . N4 C26 C2 115.16(8) 2 . loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 O1 C1 1.2266(13) . O2 C10 1.2233(13) . O3 C12 1.4114(13) . O3 C13 1.4207(13) . O4 C15 1.2239(12) . O5 C26 1.2275(12) . N1 C1 1.3619(13) . N1 C3 1.4342(13) . N1 C2 1.4545(13) . N2 C10 1.3574(13) . N2 C9 1.4505(13) . N2 C11 1.4608(13) . N3 C15 1.3614(13) . N3 C14 1.4501(12) . N3 C16 1.4718(13) . N4 C26 1.3515(13) 2 N4 C20 1.4430(12) . N4 C19 1.4554(12) . C1 C9 1.5329(14) . C2 C26 1.5358(14) . C2 H2A 0.9900 . C2 H2B 0.9900 . C3 C4 1.3918(16) . C3 C8 1.3958(15) . C4 C5 1.3918(17) . C4 H4 0.9500 . C5 C6 1.388(2) . C5 H5 0.9500 . C6 C7 1.381(2) . C6 H6 0.9500 . C7 C8 1.3954(17) . C7 H7 0.9500 . C8 H8 0.9500 . C9 H9A 0.9900 . C9 H9B 0.9900 . C10 C14 1.5335(14) . C11 C12 1.5176(14) . C11 H11A 0.9900 . C11 H11B 0.9900 . C12 H12A 0.9900 . C12 H12B 0.9900 . C13 H13A 0.9800 . C13 H13B 0.9800 . C13 H13C 0.9800 . C14 H14A 0.9900 . C14 H14B 0.9900 . C15 C19 1.5382(14) . C16 C17 1.4723(16) . C16 H16A 0.9900 . C16 H16B 0.9900 . C17 C18 1.1886(18) . C18 H18 0.9500 . C19 H19A 0.9900 . C19 H19B 0.9900 . C20 C25 1.3860(15) . C20 C21 1.3907(14) . C21 C22 1.3909(15) . C21 H21 0.9500 . C22 C23 1.3849(18) . C22 H22 0.9500 . C23 C24 1.3880(18) . C23 H23 0.9500 . C24 C25 1.3909(16) . C24 H24 0.9500 . C25 H25 0.9500 . C26 N4 1.3517(13) 2 O6 H6O 0.88(8) .