#------------------------------------------------------------------------------ #$Date: 2011-09-28 16:24:46 +0200 (Wed, 28 Sep 2011) $ #$Revision: 26848 $ #$URL: svn://www.crystallography.net/cod/cif/2/10/05/2100556.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2100556 loop_ _publ_author_name 'C. D. Antoniadis' 'A. J. Blake' 'S. K. Hadjikakou' 'N. Hadjiliadis' 'P. Hubberstey' 'M. Schr\"oder' 'C. Wilson' _publ_section_title ; Structural characterization of selenium and selenium-diiodine analogues of the antithyroid drug 6-n-propyl-2-thiouracil and its alkyl derivatives ; _journal_coeditor_code SO5003 _journal_date_accepted 2006-03-29 _journal_date_recd_electronic 2006-03-08 _journal_issue 4 _journal_name_full 'Acta Crystallographica, Section B' _journal_page_first 580 _journal_page_last 591 _journal_paper_category FA _journal_volume 62 _journal_year 2006 _chemical_formula_moiety 'C8 H12 Cl2 N2 O Se' _chemical_formula_sum 'C8 H12 Cl2 N2 O Se' _chemical_formula_weight 302.06 _chemical_name_systematic ; ? ; _symmetry_cell_setting triclinic _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method 'enCIFer editing of SHELXL97 CIF output' _cell_angle_alpha 90.450(5) _cell_angle_beta 105.350(4) _cell_angle_gamma 92.945(5) _cell_formula_units_Z 4 _cell_length_a 8.841(3) _cell_length_b 11.259(3) _cell_length_c 12.424(4) _cell_measurement_reflns_used 2249 _cell_measurement_temperature 150(2) _cell_measurement_theta_max 24.55 _cell_measurement_theta_min 2.4 _cell_volume 1190.7(6) _computing_cell_refinement 'Bruker SAINT version 6.36a (Bruker, 2000)' _computing_data_collection 'Bruker SMART version 5.625 (Bruker, 2001)' _computing_data_reduction 'Bruker SAINT; Bruker SHELXTL (Bruker, 2001)' _computing_molecular_graphics 'PLATON (Spek, 2003)' _computing_publication_material 'enCIFer (Allen et al., 2004); PLATON' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1990)' _diffrn_ambient_temperature 150(2) _diffrn_measured_fraction_theta_full 0.971 _diffrn_measured_fraction_theta_max 0.971 _diffrn_measurement_device_type 'Bruker SMART APEX CCD area detector' _diffrn_measurement_method omega _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.050 _diffrn_reflns_av_sigmaI/netI 0.113 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min -11 _diffrn_reflns_limit_k_max 14 _diffrn_reflns_limit_k_min -14 _diffrn_reflns_limit_l_max 16 _diffrn_reflns_limit_l_min -16 _diffrn_reflns_number 10743 _diffrn_reflns_theta_full 27.50 _diffrn_reflns_theta_max 27.50 _diffrn_reflns_theta_min 2.39 _diffrn_standards_decay_% 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 3.573 _exptl_absorpt_correction_T_max 1.000 _exptl_absorpt_correction_T_min 0.684 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(TWINABS version 1.02; Bruker, 2001)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.685 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 600 _exptl_crystal_size_max 0.36 _exptl_crystal_size_mid 0.22 _exptl_crystal_size_min 0.02 _refine_diff_density_max 0.87 _refine_diff_density_min -0.51 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 0.97 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 254 _refine_ls_number_reflns 6193 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 0.97 _refine_ls_R_factor_all 0.0797 _refine_ls_R_factor_gt 0.0523 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0305P)^2^] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0929 _refine_ls_wR_factor_ref 0.0985 _reflns_number_gt 4391 _reflns_number_total 6193 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file so5003.cif _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Triclinic' changed to 'triclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius ; _cod_database_code 2100556 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy N N1 0.9470(5) 0.4519(4) 0.1485(4) 0.0199(11) Uani d . 1 H H1 0.9432 0.3739 0.1409 0.024 Uiso calc R 1 C C2 0.8502(6) 0.5128(5) 0.0686(5) 0.0193(13) Uani d . 1 Se Se2 0.70612(7) 0.44056(5) -0.05032(5) 0.02365(16) Uani d . 1 N N3 0.8650(5) 0.6324(4) 0.0822(4) 0.0211(11) Uani d . 1 H H3 0.8029 0.6740 0.0308 0.025 Uiso calc R 1 C C4 0.9684(6) 0.6954(5) 0.1692(5) 0.0209(13) Uani d . 1 O O4 0.9745(4) 0.8050(3) 0.1704(3) 0.0289(10) Uani d . 1 C C5 1.0622(6) 0.6232(5) 0.2538(4) 0.0186(13) Uani d . 1 H H5 1.1316 0.6601 0.3185 0.022 Uiso calc R 1 C C6 1.0522(6) 0.5038(5) 0.2419(4) 0.0175(13) Uani d . 1 C C7 1.1449(6) 0.4176(5) 0.3218(4) 0.0187(13) Uani d . 1 H H7 1.1803 0.3554 0.2776 0.022 Uiso calc R 1 C C8 1.2905(6) 0.4788(5) 0.4025(5) 0.0309(15) Uani d . 1 H H8A 1.3569 0.5178 0.3598 0.046 Uiso calc R 1 H H8B 1.3500 0.4194 0.4509 0.046 Uiso calc R 1 H H8C 1.2577 0.5384 0.4484 0.046 Uiso calc R 1 C C9 1.0398(7) 0.3559(5) 0.3887(5) 0.0315(16) Uani d . 1 H H9A 0.9469 0.3170 0.3369 0.047 Uiso calc R 1 H H9B 1.0068 0.4154 0.4346 0.047 Uiso calc R 1 H H9C 1.0990 0.2964 0.4370 0.047 Uiso calc R 1 N N11 0.6861(5) 1.1339(4) -0.0501(4) 0.0180(11) Uani d . 1 H H11 0.6930 1.2121 -0.0462 0.022 Uiso calc R 1 C C12 0.7948(6) 1.0748(5) 0.0249(4) 0.0208(13) Uani d . 1 Se Se12 0.95588(7) 1.14876(5) 0.13130(5) 0.02879(18) Uani d . 1 N N13 0.7749(5) 0.9551(4) 0.0180(3) 0.0216(11) Uani d . 1 H H13 0.8434 0.9145 0.0660 0.026 Uiso calc R 1 C C14 0.6542(6) 0.8899(5) -0.0593(5) 0.0238(14) Uani d . 1 O O14 0.6489(4) 0.7804(3) -0.0561(3) 0.0331(11) Uani d . 1 C C15 0.5490(6) 0.9598(5) -0.1357(5) 0.0241(14) Uani d . 1 H H15 0.4645 0.9217 -0.1908 0.029 Uiso calc R 1 C C16 0.5666(6) 1.0800(5) -0.1315(4) 0.0159(12) Uani d . 1 C C17 0.4665(6) 1.1617(5) -0.2126(4) 0.0187(13) Uani d . 1 H H17 0.4393 1.2285 -0.1688 0.022 Uiso calc R 1 C C18 0.3155(6) 1.1015(5) -0.2820(5) 0.0312(15) Uani d . 1 H H18A 0.2548 1.0683 -0.2327 0.047 Uiso calc R 1 H H18B 0.3395 1.0375 -0.3277 0.047 Uiso calc R 1 H H18C 0.2541 1.1598 -0.3308 0.047 Uiso calc R 1 C C19 0.5621(7) 1.2137(5) -0.2871(5) 0.0302(15) Uani d . 1 H H19A 0.6598 1.2525 -0.2410 0.045 Uiso calc R 1 H H19B 0.5014 1.2723 -0.3359 0.045 Uiso calc R 1 H H19C 0.5869 1.1500 -0.3328 0.045 Uiso calc R 1 C C20 0.4146(7) 0.6182(5) -0.2314(5) 0.0339(16) Uani d . 1 H H20A 0.3578 0.6505 -0.1798 0.041 Uiso calc R 1 H H20B 0.5261 0.6128 -0.1895 0.041 Uiso calc R 1 Cl Cl1 0.33267(17) 0.47388(12) -0.27928(13) 0.0310(4) Uani d . 1 Cl Cl2 0.40267(19) 0.71468(13) -0.34259(14) 0.0392(4) Uani d . 1 C C21 0.1276(6) -0.0082(5) 0.3734(5) 0.0302(15) Uani d . 1 H H21A 0.1037 -0.0451 0.2977 0.036 Uiso calc R 1 H H21B 0.0372 0.0382 0.3776 0.036 Uiso calc R 1 Cl Cl3 0.29574(19) 0.08815(14) 0.39413(15) 0.0431(5) Uani d . 1 Cl Cl4 0.1519(2) -0.12112(13) 0.47302(13) 0.0420(4) Uani d . 1 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 N1 0.024(3) 0.005(2) 0.027(3) -0.0004(19) 0.001(2) -0.003(2) C2 0.019(3) 0.017(3) 0.019(3) -0.001(2) 0.001(3) 0.002(2) Se2 0.0299(4) 0.0141(3) 0.0214(3) -0.0004(3) -0.0027(3) -0.0021(3) N3 0.022(3) 0.012(2) 0.024(3) 0.003(2) -0.005(2) 0.004(2) C4 0.026(3) 0.018(3) 0.018(3) 0.001(3) 0.004(3) -0.004(3) O4 0.040(3) 0.010(2) 0.027(2) 0.0014(18) -0.007(2) -0.0035(18) C5 0.018(3) 0.022(3) 0.012(3) 0.000(2) -0.002(2) -0.003(2) C6 0.016(3) 0.022(3) 0.017(3) 0.001(2) 0.008(3) -0.004(2) C7 0.016(3) 0.019(3) 0.021(3) 0.003(2) 0.005(3) 0.003(2) C8 0.029(4) 0.028(4) 0.033(4) 0.006(3) 0.001(3) 0.005(3) C9 0.045(4) 0.016(3) 0.031(4) 0.004(3) 0.005(3) 0.009(3) N11 0.024(3) 0.006(2) 0.021(3) -0.0002(19) 0.001(2) -0.001(2) C12 0.028(3) 0.015(3) 0.020(3) 0.001(2) 0.008(3) -0.002(2) Se12 0.0347(4) 0.0138(3) 0.0279(4) -0.0002(3) -0.0089(3) -0.0023(3) N13 0.026(3) 0.014(3) 0.017(3) 0.003(2) -0.007(2) -0.002(2) C14 0.021(3) 0.024(3) 0.025(4) 0.003(3) 0.004(3) -0.003(3) O14 0.035(3) 0.013(2) 0.041(3) -0.0010(18) -0.008(2) 0.001(2) C15 0.024(3) 0.022(3) 0.023(3) -0.003(3) 0.002(3) -0.001(3) C16 0.011(3) 0.022(3) 0.016(3) 0.002(2) 0.007(2) 0.001(3) C17 0.023(3) 0.018(3) 0.014(3) 0.003(2) 0.004(3) -0.001(2) C18 0.032(4) 0.032(4) 0.026(4) 0.004(3) -0.001(3) 0.005(3) C19 0.043(4) 0.021(3) 0.023(4) 0.002(3) 0.003(3) 0.004(3) C20 0.043(4) 0.018(3) 0.035(4) -0.002(3) 0.002(3) 0.005(3) Cl1 0.0353(9) 0.0190(8) 0.0384(10) -0.0031(6) 0.0103(8) -0.0032(7) Cl2 0.0533(11) 0.0247(9) 0.0368(10) -0.0058(7) 0.0085(8) 0.0053(7) C21 0.037(4) 0.023(3) 0.024(4) -0.008(3) -0.001(3) 0.005(3) Cl3 0.0420(10) 0.0348(10) 0.0516(12) -0.0095(8) 0.0132(9) -0.0035(8) Cl4 0.0661(12) 0.0278(9) 0.0300(10) 0.0019(8) 0.0089(9) 0.0053(7) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Se Se -0.0929 2.2259 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' I I -0.4742 1.8119 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C2 N1 C6 124.3(4) C2 N1 H1 117.8 C6 N1 H1 117.8 N1 C2 N3 115.4(5) N1 C2 Se2 123.0(4) N3 C2 Se2 121.6(4) C2 N3 C4 126.1(5) C2 N3 H3 116.9 C4 N3 H3 116.9 O4 C4 N3 120.0(5) O4 C4 C5 125.1(5) N3 C4 C5 114.8(5) C6 C5 C4 120.5(5) C6 C5 H5 119.7 C4 C5 H5 119.7 C5 C6 N1 118.7(5) C5 C6 C7 126.3(5) N1 C6 C7 114.9(4) C6 C7 C8 112.0(4) C6 C7 C9 110.0(4) C8 C7 C9 109.7(5) C6 C7 H7 108.4 C8 C7 H7 108.4 C9 C7 H7 108.4 C7 C8 H8A 109.5 C7 C8 H8B 109.5 H8A C8 H8B 109.5 C7 C8 H8C 109.5 H8A C8 H8C 109.5 H8B C8 H8C 109.5 C7 C9 H9A 109.5 C7 C9 H9B 109.5 H9A C9 H9B 109.5 C7 C9 H9C 109.5 H9A C9 H9C 109.5 H9B C9 H9C 109.5 C12 N11 C16 124.4(4) C12 N11 H11 117.8 C16 N11 H11 117.8 N13 C12 N11 115.3(5) N13 C12 Se12 121.1(4) N11 C12 Se12 123.6(4) C12 N13 C14 125.6(5) C12 N13 H13 117.2 C14 N13 H13 117.2 O14 C14 N13 119.0(5) O14 C14 C15 126.3(5) N13 C14 C15 114.7(5) C16 C15 C14 121.2(5) C16 C15 H15 119.4 C14 C15 H15 119.4 C15 C16 N11 118.8(5) C15 C16 C17 125.1(5) N11 C16 C17 116.0(4) C16 C17 C18 113.4(4) C16 C17 C19 108.7(4) C18 C17 C19 110.3(5) C16 C17 H17 108.1 C18 C17 H17 108.1 C19 C17 H17 108.1 C17 C18 H18A 109.5 C17 C18 H18B 109.5 H18A C18 H18B 109.5 C17 C18 H18C 109.5 H18A C18 H18C 109.5 H18B C18 H18C 109.5 C17 C19 H19A 109.5 C17 C19 H19B 109.5 H19A C19 H19B 109.5 C17 C19 H19C 109.5 H19A C19 H19C 109.5 H19B C19 H19C 109.5 Cl2 C20 Cl1 111.3(3) Cl2 C20 H20A 109.4 Cl1 C20 H20A 109.4 Cl2 C20 H20B 109.4 Cl1 C20 H20B 109.4 H20A C20 H20B 108.0 Cl3 C21 Cl4 112.1(3) Cl3 C21 H21A 109.2 Cl4 C21 H21A 109.2 Cl3 C21 H21B 109.2 Cl4 C21 H21B 109.2 H21A C21 H21B 107.9 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance N1 C2 1.346(6) N1 C6 1.383(6) N1 H1 0.8800 C2 N3 1.351(6) C2 Se2 1.829(5) N3 C4 1.381(6) N3 H3 0.8800 C4 O4 1.232(6) C4 C5 1.440(7) C5 C6 1.348(7) C5 H5 0.9500 C6 C7 1.505(7) C7 C8 1.534(7) C7 C9 1.545(7) C7 H7 1.0000 C8 H8A 0.9800 C8 H8B 0.9800 C8 H8C 0.9800 C9 H9A 0.9800 C9 H9B 0.9800 C9 H9C 0.9800 N11 C12 1.355(6) N11 C16 1.366(6) N11 H11 0.8800 C12 N13 1.350(6) C12 Se12 1.825(5) N13 C14 1.402(6) N13 H13 0.8800 C14 O14 1.233(6) C14 C15 1.416(7) C15 C16 1.354(7) C15 H15 0.9500 C16 C17 1.506(7) C17 C18 1.508(7) C17 C19 1.512(7) C17 H17 1.0000 C18 H18A 0.9800 C18 H18B 0.9800 C18 H18C 0.9800 C19 H19A 0.9800 C19 H19B 0.9800 C19 H19C 0.9800 C20 Cl2 1.749(6) C20 Cl1 1.776(5) C20 H20A 0.9900 C20 H20B 0.9900 C21 Cl3 1.755(5) C21 Cl4 1.763(5) C21 H21A 0.9900 C21 H21B 0.9900