#------------------------------------------------------------------------------ #$Date: 2008-03-30 12:21:05 +0200 (Sun, 30 Mar 2008) $ #$Revision: 321 $ #$URL: svn://www.crystallography.net/cod/cif/2/2100554.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2100554 loop_ _publ_author_name 'C. D. Antoniadis' 'A. J. Blake' 'S. K. Hadjikakou' 'N. Hadjiliadis' 'P. Hubberstey' 'M. Schr\"oder' 'C. Wilson' _publ_section_title ; Structural characterization of selenium and selenium-diiodine analogues of the antithyroid drug 6-n-propyl-2-thiouracil and its alkyl derivatives ; _journal_coeditor_code SO5003 _journal_date_accepted 2006-03-29 _journal_date_recd_electronic 2006-03-08 _journal_issue 4 _journal_name_full 'Acta Crystallographica, Section B' _journal_page_first 580 _journal_page_last 591 _journal_paper_category FA _journal_volume 62 _journal_year 2006 _chemical_formula_moiety 'C7 H10 N2 O Se' _chemical_formula_sum 'C7 H10 N2 O Se' _chemical_formula_weight 217.13 _chemical_name_systematic ; ? ; _symmetry_cell_setting orthorhombic _symmetry_space_group_name_H-M 'P b c a' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method 'enCIFer editing of SHELXL97 CIF output' _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 16 _cell_length_a 10.568(7) _cell_length_b 11.257(7) _cell_length_c 28.79(2) _cell_measurement_reflns_used 3142 _cell_measurement_temperature 120(2) _cell_measurement_theta_max 27.45 _cell_measurement_theta_min 2.61 _cell_volume 3425(4) _computing_cell_refinement 'Bruker SAINT (Bruker, 2004)' _computing_data_collection 'Bruker APEX2 (Bruker, 2004)' _computing_data_reduction 'Bruker SAINT' _computing_molecular_graphics 'PLATON (Spek, 2003)' _computing_publication_material 'enCIFer (Allen et al., 2004); PLATON' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1990)' _diffrn_ambient_temperature 120(2) _diffrn_measured_fraction_theta_full 0.998 _diffrn_measured_fraction_theta_max 0.998 _diffrn_measurement_device_type 'Bruker SMART APEXII CCD diffractometer' _diffrn_measurement_method 'fine-slice \w scans' _diffrn_radiation_monochromator 'silicon 111' _diffrn_radiation_source 'Daresbury SRS station 9.8' _diffrn_radiation_type synchrotron _diffrn_radiation_wavelength 0.6775 _diffrn_reflns_av_R_equivalents 0.250 _diffrn_reflns_av_sigmaI/netI 0.118 _diffrn_reflns_limit_h_max 13 _diffrn_reflns_limit_h_min -13 _diffrn_reflns_limit_k_max 14 _diffrn_reflns_limit_k_min -14 _diffrn_reflns_limit_l_max 35 _diffrn_reflns_limit_l_min -35 _diffrn_reflns_number 24855 _diffrn_reflns_theta_full 25.00 _diffrn_reflns_theta_max 25.00 _diffrn_reflns_theta_min 2.61 _diffrn_standards_decay_% 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 4.330 _exptl_absorpt_correction_T_max 1.000 _exptl_absorpt_correction_T_min 0.260 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Bruker, 2004)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.684 _exptl_crystal_density_method 'not measured' _exptl_crystal_description lath _exptl_crystal_F_000 1728 _exptl_crystal_size_max 0.20 _exptl_crystal_size_mid 0.02 _exptl_crystal_size_min 0.01 _refine_diff_density_max 2.38 _refine_diff_density_min -2.33 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.18 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 99 _refine_ls_number_reflns 3471 _refine_ls_number_restraints 35 _refine_ls_restrained_S_all 1.17 _refine_ls_R_factor_all 0.210 _refine_ls_R_factor_gt 0.173 _refine_ls_shift/su_max 0.002 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.025P)^2^+367.0] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.387 _refine_ls_wR_factor_ref 0.408 _reflns_number_gt 2417 _reflns_number_total 3471 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file so5003.cif loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' '-x, y+1/2, -z+1/2' 'x+1/2, -y+1/2, -z' '-x, -y, -z' 'x-1/2, y, -z-1/2' 'x, -y-1/2, z-1/2' '-x-1/2, y-1/2, z' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Se Se -0.0929 2.2259 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy Se Se1 0.0749(2) 0.28948(18) 0.32853(8) 0.0333(6) Uani d DU 1 C C1 0.0909(13) 0.3523(15) 0.3871(5) 0.028(5) Uiso d DU 1 N N2 0.1159(11) 0.2874(14) 0.4243(5) 0.030(4) Uiso d DU 1 H H2N 0.1205 0.2098 0.4209 0.036 Uiso calc R 1 C C3 0.1356(10) 0.3339(16) 0.4688(6) 0.029(5) Uiso d DU 1 C C4 0.1287(11) 0.4523(16) 0.4746(6) 0.031(5) Uiso d DU 1 H H4 0.1418 0.4851 0.5046 0.038 Uiso calc R 1 C C5 0.1019(10) 0.5304(16) 0.4361(6) 0.026(4) Uiso d DU 1 O O5 0.0948(13) 0.6397(11) 0.4387(5) 0.035(4) Uiso d DU 1 N N6 0.0851(11) 0.4741(13) 0.3950(5) 0.030(4) Uiso d DU 1 H H6N 0.0688 0.5192 0.3708 0.036 Uiso calc R 1 C C11 0.1625(16) 0.2460(17) 0.5061(6) 0.033(5) Uiso d DU 1 H H11A 0.2134 0.1807 0.4925 0.040 Uiso calc R 1 H H11B 0.0812 0.2115 0.5165 0.040 Uiso calc R 1 C C12 0.232(2) 0.294(2) 0.5484(7) 0.042(6) Uiso d DU 1 H H12A 0.3082 0.3376 0.5380 0.051 Uiso calc R 1 H H12B 0.1765 0.3504 0.5650 0.051 Uiso calc R 1 C C13 0.272(3) 0.198(2) 0.5815(8) 0.049(7) Uiso d DU 1 H H13A 0.3187 0.2328 0.6075 0.074 Uiso calc R 1 H H13B 0.3262 0.1404 0.5653 0.074 Uiso calc R 1 H H13C 0.1967 0.1566 0.5934 0.074 Uiso calc R 1 Se Se21 0.0605(2) 0.98622(17) 0.42671(9) 0.0360(7) Uani d DU 1 C C21 0.0857(14) 0.9209(16) 0.3690(6) 0.038(6) Uiso d DU 1 N N22 0.1047(11) 0.9839(14) 0.3309(5) 0.032(4) Uiso d DU 1 H H22N 0.1075 1.0617 0.3337 0.038 Uiso calc R 1 C C23 0.1207(11) 0.9360(16) 0.2866(6) 0.033(5) Uiso d DU 1 C C24 0.1164(12) 0.8173(16) 0.2817(6) 0.033(5) Uiso d DU 1 H H24 0.1262 0.7833 0.2517 0.040 Uiso calc R 1 C C25 0.0971(11) 0.7407(18) 0.3212(7) 0.073(10) Uiso d DU 1 O O25 0.0912(12) 0.6312(11) 0.3195(4) 0.027(3) Uiso d DU 1 N N26 0.0822(11) 0.7987(14) 0.3624(5) 0.034(4) Uiso d DU 1 H H26N 0.0691 0.7545 0.3871 0.041 Uiso calc R 1 C C31 0.1410(18) 1.0226(18) 0.2482(7) 0.043(6) Uiso d DU 1 H H31A 0.1761 1.0967 0.2615 0.051 Uiso calc R 1 H H31B 0.0580 1.0421 0.2342 0.051 Uiso calc R 1 C C32 0.229(2) 0.979(2) 0.2099(7) 0.045(6) Uiso d DU 1 H H32A 0.3116 0.9574 0.2237 0.054 Uiso calc R 1 H H32B 0.1927 0.9074 0.1955 0.054 Uiso calc R 1 C C33 0.251(2) 1.071(2) 0.1729(7) 0.040(6) Uiso d DU 1 H H33A 0.3081 1.0394 0.1493 0.060 Uiso calc R 1 H H33B 0.2882 1.1425 0.1868 0.060 Uiso calc R 1 H H33C 0.1697 1.0920 0.1584 0.060 Uiso calc R 1 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Se1 0.0392(13) 0.0120(10) 0.0486(14) -0.0005(10) -0.0017(11) 0.0015(9) Se21 0.0482(14) 0.0083(10) 0.0516(14) -0.0012(10) 0.0005(12) 0.0001(9) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance Se1 C1 1.837(16) C1 N2 1.32(2) C1 N6 1.39(2) N2 C3 1.40(2) N2 H2N 0.8800 C3 C4 1.34(2) C3 C11 1.49(2) C4 C5 1.44(2) C4 H4 0.9500 C5 O5 1.23(2) C5 N6 1.36(2) N6 H6N 0.8800 C11 C12 1.52(2) C11 H11A 0.9900 C11 H11B 0.9900 C12 C13 1.50(3) C12 H12A 0.9900 C12 H12B 0.9900 C13 H13A 0.9800 C13 H13B 0.9800 C13 H13C 0.9800 Se21 C21 1.835(16) C21 N22 1.32(2) C21 N26 1.39(2) N22 C23 1.40(2) N22 H22N 0.8800 C23 C24 1.34(2) C23 C31 1.49(2) C24 C25 1.44(2) C24 H24 0.9500 C25 O25 1.24(2) C25 N26 1.36(2) N26 H26N 0.8800 C31 C32 1.52(2) C31 H31A 0.9900 C31 H31B 0.9900 C32 C33 1.50(2) C32 H32A 0.9900 C32 H32B 0.9900 C33 H33A 0.9800 C33 H33B 0.9800 C33 H33C 0.9800 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle N2 C1 N6 115.0(15) N2 C1 Se1 123.3(13) N6 C1 Se1 121.7(12) C1 N2 C3 124.3(15) C1 N2 H2N 117.9 C3 N2 H2N 117.9 C4 C3 N2 118.5(16) C4 C3 C11 125.4(16) N2 C3 C11 116.1(15) C3 C4 C5 121.2(17) C3 C4 H4 119.4 C5 C4 H4 119.4 O5 C5 N6 120.6(17) O5 C5 C4 125.0(17) N6 C5 C4 114.3(16) C5 N6 C1 126.7(15) C5 N6 H6N 116.7 C1 N6 H6N 116.7 C3 C11 C12 115.9(15) C3 C11 H11A 108.3 C12 C11 H11A 108.3 C3 C11 H11B 108.3 C12 C11 H11B 108.3 H11A C11 H11B 107.4 C13 C12 C11 113.0(17) C13 C12 H12A 109.0 C11 C12 H12A 109.0 C13 C12 H12B 109.0 C11 C12 H12B 109.0 H12A C12 H12B 107.8 C12 C13 H13A 109.5 C12 C13 H13B 109.5 H13A C13 H13B 109.5 C12 C13 H13C 109.5 H13A C13 H13C 109.5 H13B C13 H13C 109.5 N22 C21 N26 114.9(15) N22 C21 Se21 123.9(13) N26 C21 Se21 121.2(12) C21 N22 C23 124.8(15) C21 N22 H22N 117.6 C23 N22 H22N 117.6 C24 C23 N22 118.4(16) C24 C23 C31 125.3(17) N22 C23 C31 116.3(15) C23 C24 C25 121.1(17) C23 C24 H24 119.4 C25 C24 H24 119.4 O25 C25 N26 120.4(18) O25 C25 C24 125.0(18) N26 C25 C24 114.6(17) C25 N26 C21 126.2(16) C25 N26 H26N 116.9 C21 N26 H26N 116.9 C23 C31 C32 114.7(15) C23 C31 H31A 108.6 C32 C31 H31A 108.6 C23 C31 H31B 108.6 C32 C31 H31B 108.6 H31A C31 H31B 107.6 C33 C32 C31 112.8(17) C33 C32 H32A 109.0 C31 C32 H32A 109.0 C33 C32 H32B 109.0 C31 C32 H32B 109.0 H32A C32 H32B 107.8 C32 C33 H33A 109.5 C32 C33 H33B 109.5 H33A C33 H33B 109.5 C32 C33 H33C 109.5 H33A C33 H33C 109.5 H33B C33 H33C 109.5