#------------------------------------------------------------------------------ #$Date: 2013-12-28 14:58:47 +0100 (Sat, 28 Dec 2013) $ #$Revision: 91933 $ #$URL: svn://www.crystallography.net/cod/cif/2/10/05/2100553.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2100553 loop_ _publ_author_name 'C. D. Antoniadis' 'A. J. Blake' 'S. K. Hadjikakou' 'N. Hadjiliadis' 'P. Hubberstey' 'M. Schr\"oder' 'C. Wilson' _publ_section_title ; Structural characterization of selenium and selenium-diiodine analogues of the antithyroid drug 6-n-propyl-2-thiouracil and its alkyl derivatives ; _journal_coeditor_code SO5003 _journal_date_accepted 2006-03-29 _journal_date_recd_electronic 2006-03-08 _journal_issue 4 _journal_name_full 'Acta Crystallographica Section B' _journal_page_first 580 _journal_page_last 591 _journal_paper_category FA _journal_volume 62 _journal_year 2006 _chemical_formula_moiety 'C6 H8 N2 O Se' _chemical_formula_sum 'C6 H8 N2 O Se' _chemical_formula_weight 203.10 _chemical_name_systematic ; ? ; _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method 'enCIFer editing of SHELXL97 CIF output' _cell_angle_alpha 101.023(4) _cell_angle_beta 100.893(4) _cell_angle_gamma 105.705(4) _cell_formula_units_Z 6 _cell_length_a 8.394(2) _cell_length_b 10.029(2) _cell_length_c 14.931(4) _cell_measurement_reflns_used 2232 _cell_measurement_temperature 150(2) _cell_measurement_theta_max 24.8 _cell_measurement_theta_min 2.65 _cell_volume 1148.5(5) _computing_cell_refinement 'Bruker SAINT version 6.36a (Bruker, 2000)' _computing_data_collection 'Bruker SMART version 5.625 (Bruker, 2001)' _computing_data_reduction 'Bruker SAINT; Bruker SHELXTL (Bruker, 2001)' _computing_molecular_graphics 'PLATON (Spek, 2003)' _computing_publication_material 'enCIFer (Allen et al., 2004); PLATON' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1990)' _diffrn_ambient_temperature 150(2) _diffrn_measured_fraction_theta_full 0.991 _diffrn_measured_fraction_theta_max 0.991 _diffrn_measurement_device_type 'Bruker SMART APEX CCD area detector' _diffrn_measurement_method omega _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'normal-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.038 _diffrn_reflns_av_sigmaI/netI 0.057 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min -10 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -11 _diffrn_reflns_limit_l_max 17 _diffrn_reflns_limit_l_min -17 _diffrn_reflns_number 8174 _diffrn_reflns_theta_full 25.07 _diffrn_reflns_theta_max 25.07 _diffrn_reflns_theta_min 2.28 _diffrn_standards_decay_% 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 4.835 _exptl_absorpt_correction_T_max 1.000 _exptl_absorpt_correction_T_min 0.687 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS version 2.03; Bruker, 2001)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.762 _exptl_crystal_density_method 'not measured' _exptl_crystal_description 'triangular prism' _exptl_crystal_F_000 600 _exptl_crystal_size_max 0.21 _exptl_crystal_size_mid 0.12 _exptl_crystal_size_min 0.04 _refine_diff_density_max 1.48 _refine_diff_density_min -1.02 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.03 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 271 _refine_ls_number_reflns 4025 _refine_ls_number_restraints 69 _refine_ls_restrained_S_all 1.02 _refine_ls_R_factor_all 0.0724 _refine_ls_R_factor_gt 0.0560 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.094P)^2^] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.136 _refine_ls_wR_factor_ref 0.146 _reflns_number_gt 3189 _reflns_number_total 4025 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file so5003.cif _[local]_cod_data_source_block 2 _[local]_cod_cif_authors_sg_H-M P-1 _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Triclinic' changed to 'triclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Triclinic' changed to 'triclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2100553 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy N N11 0.3293(6) 0.8677(5) 1.0200(3) 0.0162(10) Uani d U 1 H H11 0.3777 0.8461 1.0705 0.019 Uiso calc R 1 C C12 0.2680(7) 0.9799(6) 1.0320(4) 0.0170(12) Uani d U 1 Se Se12 0.27048(8) 1.08298(6) 1.14818(4) 0.0202(2) Uani d U 1 N N13 0.2027(6) 1.0113(5) 0.9517(3) 0.0183(11) Uani d U 1 H H13 0.1618 1.0836 0.9583 0.022 Uiso calc R 1 C C14 0.1931(8) 0.9420(7) 0.8602(4) 0.0198(13) Uani d U 1 O O14 0.1350(6) 0.9862(5) 0.7932(3) 0.0254(10) Uani d U 1 C C15 0.2547(8) 0.8195(6) 0.8531(4) 0.0194(13) Uani d U 1 H H15 0.2494 0.7635 0.7929 0.023 Uiso calc R 1 C C16 0.3197(8) 0.7852(6) 0.9323(4) 0.0186(13) Uani d U 1 C C17 0.3885(8) 0.6621(6) 0.9367(5) 0.0218(14) Uani d U 1 H H17A 0.3284 0.6041 0.9742 0.026 Uiso calc R 1 H H17B 0.5112 0.7013 0.9706 0.026 Uiso calc R 1 C C18 0.3707(9) 0.5628(7) 0.8409(5) 0.0286(16) Uani d U 1 H H18A 0.4180 0.4859 0.8508 0.043 Uiso calc R 1 H H18B 0.4334 0.6179 0.8037 0.043 Uiso calc R 1 H H18C 0.2495 0.5211 0.8069 0.043 Uiso calc R 1 N N21 0.9297(6) 0.4151(5) 0.8474(3) 0.0188(11) Uani d U 1 H H21 0.9349 0.4819 0.8967 0.023 Uiso calc R 1 Se Se22 1.10728(8) 0.31656(6) 0.98373(4) 0.0199(2) Uani d U 1 C C22 1.0003(7) 0.3140(6) 0.8630(4) 0.0163(12) Uani d U 1 N N23 0.9863(7) 0.2112(5) 0.7863(3) 0.0185(11) Uani d U 1 H H23 1.0347 0.1454 0.7947 0.022 Uiso calc R 1 C C24 0.9002(8) 0.2019(7) 0.6944(4) 0.0225(14) Uani d U 1 O O24 0.8883(6) 0.0990(5) 0.6294(3) 0.0299(11) Uani d U 1 C C25 0.8338(8) 0.3177(6) 0.6841(4) 0.0217(14) Uani d U 1 H H25 0.7783 0.3210 0.6233 0.026 Uiso calc R 1 C C26 0.8502(8) 0.4215(6) 0.7606(4) 0.0192(13) Uani d U 1 C C27 0.7818(9) 0.5460(7) 0.7603(4) 0.0248(14) Uani d U 1 H H27A 0.6857 0.5315 0.7908 0.030 Uiso calc R 1 H H27B 0.8730 0.6344 0.7995 0.030 Uiso calc R 1 C C28 0.7202(12) 0.5692(9) 0.6649(5) 0.048(2) Uani d U 1 H H28A 0.6788 0.6521 0.6724 0.072 Uiso calc R 1 H H28B 0.6268 0.4838 0.6258 0.072 Uiso calc R 1 H H28C 0.8147 0.5867 0.6344 0.072 Uiso calc R 1 N N31 0.7033(7) 0.9832(5) 0.4380(4) 0.0222(12) Uani d U 1 H H31 0.7555 1.0315 0.4968 0.027 Uiso calc R 1 C C32 0.6233(8) 1.0491(7) 0.3819(4) 0.0233(14) Uani d U 1 Se Se32 0.62624(11) 1.23434(7) 0.41986(5) 0.0368(2) Uani d U 1 N N33 0.5403(7) 0.9682(5) 0.2936(4) 0.0212(12) Uani d U 1 H H33 0.4826 1.0070 0.2566 0.025 Uiso calc R 1 O O34 0.4622(6) 0.7690(4) 0.1719(3) 0.0266(11) Uani d U 1 C C34 0.5370(8) 0.8274(6) 0.2550(4) 0.0216(14) Uani d U 1 C C35 0.6296(8) 0.7701(6) 0.3200(4) 0.0221(14) Uani d U 1 H H35 0.6351 0.6762 0.2993 0.027 Uiso calc R 1 C C36 0.7090(8) 0.8454(6) 0.4098(4) 0.0203(13) Uani d U 1 C C37 0.8074(9) 0.7937(7) 0.4832(4) 0.0259(15) Uani d U 1 H H37A 0.7522 0.7931 0.5362 0.031 Uiso calc R 1 H H37B 0.9247 0.8627 0.5081 0.031 Uiso calc R 1 C C38 0.8198(10) 0.6442(7) 0.4475(5) 0.0326(17) Uani d U 1 H H38A 0.8854 0.6184 0.4993 0.049 Uiso calc R 1 H H38B 0.8774 0.6441 0.3962 0.049 Uiso calc R 1 H H38C 0.7045 0.5744 0.4242 0.049 Uiso calc R 1 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 N11 0.020(3) 0.010(2) 0.018(3) 0.008(2) 0.002(2) 0.002(2) C12 0.017(3) 0.009(3) 0.024(3) 0.003(2) 0.003(2) 0.003(2) Se12 0.0299(4) 0.0105(3) 0.0217(4) 0.0122(3) 0.0052(3) 0.0006(2) N13 0.025(3) 0.010(3) 0.022(3) 0.010(2) 0.004(2) 0.002(2) C14 0.022(3) 0.016(3) 0.022(3) 0.008(3) 0.007(3) 0.003(3) O14 0.041(3) 0.020(2) 0.023(2) 0.020(2) 0.009(2) 0.0068(19) C15 0.029(3) 0.008(3) 0.022(3) 0.009(3) 0.007(3) 0.000(2) C16 0.023(3) 0.010(3) 0.025(3) 0.006(3) 0.011(3) 0.003(2) C17 0.023(3) 0.011(3) 0.032(4) 0.011(3) 0.004(3) 0.003(3) C18 0.044(4) 0.010(3) 0.036(4) 0.017(3) 0.012(3) 0.000(3) N21 0.031(3) 0.010(3) 0.015(2) 0.012(2) 0.003(2) -0.002(2) Se22 0.0325(4) 0.0099(3) 0.0178(3) 0.0130(3) 0.0012(3) 0.0009(2) C22 0.017(3) 0.010(3) 0.020(3) 0.003(2) 0.003(2) 0.004(2) N23 0.031(3) 0.008(2) 0.019(2) 0.013(2) 0.004(2) 0.002(2) C24 0.036(4) 0.017(3) 0.017(3) 0.012(3) 0.007(3) 0.003(2) O24 0.053(3) 0.016(2) 0.023(2) 0.022(2) 0.004(2) 0.0002(19) C25 0.036(4) 0.016(3) 0.017(3) 0.016(3) 0.005(3) 0.006(2) C26 0.027(3) 0.014(3) 0.021(3) 0.011(3) 0.007(3) 0.008(2) C27 0.034(4) 0.022(4) 0.021(3) 0.019(3) 0.005(3) 0.001(3) C28 0.086(7) 0.041(5) 0.042(5) 0.052(5) 0.020(4) 0.022(4) N31 0.034(3) 0.010(3) 0.018(3) 0.011(2) -0.001(2) -0.003(2) C32 0.031(4) 0.016(3) 0.022(3) 0.011(3) 0.002(3) 0.002(2) Se32 0.0651(6) 0.0163(4) 0.0275(4) 0.0273(4) -0.0039(4) -0.0026(3) N33 0.036(3) 0.009(2) 0.022(3) 0.013(2) 0.004(2) 0.006(2) O34 0.045(3) 0.012(2) 0.020(2) 0.015(2) 0.000(2) -0.0016(18) C34 0.032(4) 0.012(3) 0.021(3) 0.009(3) 0.006(3) 0.002(2) C35 0.039(4) 0.005(3) 0.023(3) 0.012(3) 0.006(3) 0.000(2) C36 0.029(4) 0.013(3) 0.024(3) 0.012(3) 0.007(3) 0.007(2) C37 0.043(4) 0.017(3) 0.021(3) 0.020(3) 0.003(3) 0.001(3) C38 0.055(5) 0.022(4) 0.030(4) 0.025(3) 0.011(3) 0.009(3) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Se Se -0.0929 2.2259 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C12 N11 C16 123.3(5) C12 N11 H11 118.3 C16 N11 H11 118.3 N13 C12 N11 115.3(5) N13 C12 Se12 121.6(4) N11 C12 Se12 123.2(4) C12 N13 C14 127.1(5) C12 N13 H13 116.4 C14 N13 H13 116.4 O14 C14 N13 119.9(5) O14 C14 C15 125.9(6) N13 C14 C15 114.2(5) C16 C15 C14 119.8(6) C16 C15 H15 120.1 C14 C15 H15 120.1 C15 C16 N11 120.1(5) C15 C16 C17 126.2(5) N11 C16 C17 113.7(5) C16 C17 C18 115.4(5) C16 C17 H17A 108.4 C18 C17 H17A 108.4 C16 C17 H17B 108.4 C18 C17 H17B 108.4 H17A C17 H17B 107.5 C17 C18 H18A 109.5 C17 C18 H18B 109.5 H18A C18 H18B 109.5 C17 C18 H18C 109.5 H18A C18 H18C 109.5 H18B C18 H18C 109.5 C22 N21 C26 124.5(5) C22 N21 H21 117.8 C26 N21 H21 117.8 N21 C22 N23 116.2(5) N21 C22 Se22 121.0(4) N23 C22 Se22 122.8(4) C22 N23 C24 124.6(5) C22 N23 H23 117.7 C24 N23 H23 117.7 O24 C24 N23 119.3(6) O24 C24 C25 125.5(6) N23 C24 C25 115.1(5) C26 C25 C24 120.1(6) C26 C25 H25 120.0 C24 C25 H25 120.0 C25 C26 N21 119.3(6) C25 C26 C27 125.6(6) N21 C26 C27 115.1(5) C28 C27 C26 115.9(5) C28 C27 H27A 108.3 C26 C27 H27A 108.3 C28 C27 H27B 108.3 C26 C27 H27B 108.3 H27A C27 H27B 107.4 C27 C28 H28A 109.5 C27 C28 H28B 109.5 H28A C28 H28B 109.5 C27 C28 H28C 109.5 H28A C28 H28C 109.5 H28B C28 H28C 109.5 C32 N31 C36 124.8(5) C32 N31 H31 117.6 C36 N31 H31 117.6 N33 C32 N31 115.0(5) N33 C32 Se32 121.3(5) N31 C32 Se32 123.7(5) C32 N33 C34 126.3(5) C32 N33 H33 116.9 C34 N33 H33 116.9 O34 C34 N33 119.1(6) O34 C34 C35 127.2(6) N33 C34 C35 113.7(5) C36 C35 C34 121.9(6) C36 C35 H35 119.0 C34 C35 H35 119.0 C35 C36 N31 118.3(5) C35 C36 C37 125.7(6) N31 C36 C37 116.1(5) C36 C37 C38 114.5(5) C36 C37 H37A 108.6 C38 C37 H37A 108.6 C36 C37 H37B 108.6 C38 C37 H37B 108.6 H37A C37 H37B 107.6 C37 C38 H38A 109.5 C37 C38 H38B 109.5 H38A C38 H38B 109.5 C37 C38 H38C 109.5 H38A C38 H38C 109.5 H38B C38 H38C 109.5 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance N11 C12 1.355(7) N11 C16 1.384(7) N11 H11 0.8800 C12 N13 1.351(8) C12 Se12 1.835(6) N13 C14 1.386(8) N13 H13 0.8800 C14 O14 1.240(7) C14 C15 1.450(8) C15 C16 1.353(9) C15 H15 0.9500 C16 C17 1.504(8) C17 C18 1.534(9) C17 H17A 0.9900 C17 H17B 0.9900 C18 H18A 0.9800 C18 H18B 0.9800 C18 H18C 0.9800 N21 C22 1.340(7) N21 C26 1.363(8) N21 H21 0.8800 Se22 C22 1.848(6) C22 N23 1.350(8) N23 C24 1.397(8) N23 H23 0.8800 C24 O24 1.241(7) C24 C25 1.439(9) C25 C26 1.347(9) C25 H25 0.9500 C26 C27 1.510(8) C27 C28 1.504(9) C27 H27A 0.9900 C27 H27B 0.9900 C28 H28A 0.9800 C28 H28B 0.9800 C28 H28C 0.9800 N31 C32 1.353(8) N31 C36 1.382(8) N31 H31 0.8800 C32 N33 1.349(8) C32 Se32 1.828(6) N33 C34 1.410(8) N33 H33 0.8800 O34 C34 1.227(7) C34 C35 1.431(9) C35 C36 1.347(9) C35 H35 0.9500 C36 C37 1.503(8) C37 C38 1.530(8) C37 H37A 0.9900 C37 H37B 0.9900 C38 H38A 0.9800 C38 H38B 0.9800 C38 H38C 0.9800 _journal_paper_doi 10.1107/S0108768106011426