#------------------------------------------------------------------------------ #$Date: 2015-01-23 13:30:19 +0100 (Fri, 23 Jan 2015) $ #$Revision: 130086 $ #$URL: svn://www.crystallography.net/cod/cif/2/10/03/2100303.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2100303 loop_ _publ_author_name 'Cowan, John. A.' 'Howard, Judith A. K.' 'McIntyre, Garry, J.' 'Lo, Samuel M.-F' 'Williams, Ian D.' _publ_section_title ; Variable-temperature neutron diffraction studies of the short, strong hydrogen bonds in the crystal structure of pyridine-3,5-dicarboxylic acid ; _journal_coeditor_code BS5020 _journal_issue 6 _journal_name_full 'Acta Crystallographica Section B' _journal_page_first 724 _journal_page_last 730 _journal_paper_doi 10.1107/S0108768105030077 _journal_volume 61 _journal_year 2005 _chemical_formula_moiety 'C7 H3 D2 O4' _chemical_formula_sum 'C7 H3 D2 N O4' _chemical_formula_weight 169.0 _chemical_name_common 'Dinicotinic Acid' _chemical_name_systematic ; Pyridine-3,5-dicarboxylic acid ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens difmap _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 108.754(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 9.7196(13) _cell_length_b 11.1396(17) _cell_length_c 6.4540(13) _cell_measurement_reflns_used 1163 _cell_measurement_temperature 15(2) _cell_measurement_theta_max 35.93 _cell_measurement_theta_min 3.91 _cell_volume 661.69(19) _computing_cell_refinement 'RAFD9 (Filhol, 1998)' _computing_data_collection 'MAD and HKLGEN (Barthelemy, 1984)' _computing_data_reduction 'RACER (Wilkinson, et al. 1988)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 15(2) _diffrn_measured_fraction_theta_full 0.949 _diffrn_measured_fraction_theta_max 0.949 _diffrn_measurement_device_type D9 _diffrn_measurement_method 'theta - two theta scans' _diffrn_radiation_monochromator 'Copper (2 2 0)' _diffrn_radiation_probe neutron _diffrn_radiation_source 'ILL high flux reactor' _diffrn_radiation_type neutron _diffrn_radiation_wavelength 0.84060(10) _diffrn_reflns_av_R_equivalents 0.0123 _diffrn_reflns_av_sigmaI/netI 0.0342 _diffrn_reflns_limit_h_max 13 _diffrn_reflns_limit_h_min -7 _diffrn_reflns_limit_k_max 15 _diffrn_reflns_limit_k_min -15 _diffrn_reflns_limit_l_max 8 _diffrn_reflns_limit_l_min -8 _diffrn_reflns_number 2116 _diffrn_reflns_theta_full 35.96 _diffrn_reflns_theta_max 35.96 _diffrn_reflns_theta_min 3.40 _diffrn_standards_decay_% none _diffrn_standards_interval_count 50 _diffrn_standards_number 2 _exptl_absorpt_coefficient_mu 0.054 _exptl_absorpt_correction_T_max 0.957 _exptl_absorpt_correction_T_min 0.916 _exptl_absorpt_correction_type integration _exptl_absorpt_process_details 'DATAP (Coppens, 1979)' _exptl_crystal_colour 'pale brown' _exptl_crystal_density_diffrn 1.681 _exptl_crystal_density_meas ? _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 255 _exptl_crystal_size_max 2.7 _exptl_crystal_size_mid 1.5 _exptl_crystal_size_min 0.9 _refine_diff_density_max 1.011 _refine_diff_density_min -1.043 _refine_ls_extinction_coef 0.0070(16) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXL _refine_ls_goodness_of_fit_ref 2.083 _refine_ls_hydrogen_treatment refall _refine_ls_matrix_type full _refine_ls_number_parameters 156 _refine_ls_number_reflns 1792 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 2.083 _refine_ls_R_factor_all 0.0664 _refine_ls_R_factor_gt 0.0583 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0500P)^2^+0.0000P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1511 _refine_ls_wR_factor_ref 0.1596 _reflns_number_gt 1635 _reflns_number_total 1792 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file bs5020.cif _[local]_cod_data_source_block dad15 _[local]_cod_cif_authors_sg_H-M 'P 21/c' _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana The following automatic conversions were performed: '_exptl_crystal_density_meas' value 'not measured' was changed to '?' - the value is perceived as not measured. Automatic conversion script Id: cif_fix_values 3008 2015-01-20 13:52:24Z robertas ; _cod_database_code 2100303 _cod_database_fobs_code 2100303 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol C2 -0.31825(19) -0.34616(17) 0.2184(3) 0.0064(4) Uani d . 1 . . C C3 -0.3897(2) -0.44952(15) 0.2507(3) 0.0059(4) Uani d . 1 . . C C4 -0.31936(19) -0.56033(16) 0.2675(3) 0.0056(4) Uani d . 1 . . C C5 -0.17971(19) -0.56593(16) 0.2503(3) 0.0055(4) Uani d . 1 . . C C6 -0.11472(19) -0.45937(16) 0.2187(3) 0.0065(4) Uani d . 1 . . C C7 -0.54041(19) -0.44351(16) 0.2650(3) 0.0054(4) Uani d . 1 . . C C8 -0.09387(19) -0.68080(16) 0.2687(3) 0.0054(4) Uani d . 1 . . C H1 -0.3653(12) -0.2551(9) 0.2073(18) 0.0152(19) Uani d P 0.20 . . D H2 -0.3747(5) -0.6404(4) 0.2937(8) 0.0220(9) Uani d . 1 . . H H3 -0.0053(14) -0.4558(10) 0.208(2) 0.022(2) Uani d P 0.20 . . D D4 -0.6889(3) -0.3221(2) 0.2683(4) 0.0144(5) Uani d P 0.88 . . D D5 0.1203(3) -0.7685(2) 0.3076(4) 0.0177(5) Uani d P 0.88 . . D N1 -0.18432(14) -0.35410(11) 0.2021(2) 0.0067(3) Uani d . 1 . . N O1 -0.5835(2) -0.33141(19) 0.2726(4) 0.0090(4) Uani d . 1 . . O O2 -0.6124(2) -0.53294(19) 0.2657(3) 0.0075(4) Uani d . 1 . . O O3 -0.1546(2) -0.78138(18) 0.2512(4) 0.0077(4) Uani d . 1 . . O O4 0.0406(2) -0.66458(19) 0.3028(4) 0.0092(4) Uani d . 1 . . O loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 C2 0.0040(8) 0.0043(8) 0.0114(8) 0.0004(6) 0.0032(6) 0.0007(6) C3 0.0059(8) 0.0018(8) 0.0108(8) 0.0008(6) 0.0040(6) -0.0004(6) C4 0.0046(8) 0.0028(8) 0.0096(8) 0.0007(6) 0.0027(6) 0.0001(6) C5 0.0042(8) 0.0037(8) 0.0089(8) 0.0016(6) 0.0024(6) 0.0002(6) C6 0.0056(8) 0.0036(8) 0.0119(8) -0.0002(6) 0.0050(6) -0.0001(6) C7 0.0048(7) 0.0029(8) 0.0096(8) 0.0003(6) 0.0037(6) -0.0003(5) C8 0.0037(7) 0.0022(8) 0.0109(8) 0.0005(6) 0.0034(6) -0.0008(6) H1 0.019(5) 0.008(4) 0.021(5) 0.005(4) 0.009(4) 0.005(4) H2 0.023(2) 0.0100(17) 0.039(2) -0.0022(15) 0.0175(18) -0.0005(16) H3 0.023(6) 0.011(5) 0.033(6) 0.002(4) 0.011(5) 0.003(4) D4 0.0113(10) 0.0123(11) 0.0219(11) 0.0020(8) 0.0085(8) 0.0014(8) D5 0.0159(11) 0.0159(12) 0.0230(12) -0.0054(9) 0.0087(9) -0.0040(9) N1 0.0049(6) 0.0028(6) 0.0129(6) -0.0005(4) 0.0038(4) 0.0004(4) O1 0.0089(10) 0.0041(9) 0.0159(10) 0.0014(7) 0.0067(7) 0.0011(7) O2 0.0071(9) 0.0039(9) 0.0120(9) -0.0022(7) 0.0036(7) -0.0001(7) O3 0.0065(9) 0.0026(9) 0.0148(9) -0.0007(7) 0.0047(7) 0.0013(7) O4 0.0059(9) 0.0041(9) 0.0176(10) 0.0005(7) 0.0036(7) -0.0019(7) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_source C C 'V.F. Sears, Neutron News, Vol. 3, 1992' H H 'V.F. Sears, Neutron News, Vol. 3, 1992' N N 'V.F. Sears, Neutron News, Vol. 3, 1992' O O 'V.F. Sears, Neutron News, Vol. 3, 1992' D D 'V.F. Sears, Neutron News, Vol. 3, 1992' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle H1 C2 N1 . 116.5(6) H1 C2 C3 . 123.5(6) N1 C2 C3 . 119.97(16) C2 C3 C4 . 119.07(17) C2 C3 C7 . 121.07(15) C4 C3 C7 . 119.86(15) C3 C4 C5 . 119.74(16) C3 C4 H2 . 119.0(3) C5 C4 H2 . 121.3(3) C6 C5 C4 . 118.16(16) C6 C5 C8 . 117.98(16) C4 C5 C8 . 123.84(16) H3 C6 N1 . 116.2(6) H3 C6 C5 . 122.7(6) N1 C6 C5 . 121.14(16) O2 C7 O1 . 125.63(19) O2 C7 C3 . 122.54(17) O1 C7 C3 . 111.82(16) O3 C8 O4 . 124.94(19) O3 C8 C5 . 121.14(17) O4 C8 C5 . 113.92(17) D5 N1 C6 2 117.46(17) D5 N1 C2 2 120.29(17) C6 N1 C2 . 121.91(14) D4 O1 C7 . 115.0(2) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag C2 H1 . 1.105(11) ? C2 N1 . 1.342(2) ? C2 C3 . 1.395(2) ? C3 C4 . 1.398(2) ? C3 C7 . 1.498(2) ? C4 C5 . 1.398(2) ? C4 H2 . 1.083(4) ? C5 C6 . 1.390(2) ? C5 C8 . 1.511(2) ? C6 H3 . 1.089(13) ? C6 N1 . 1.341(2) ? C7 O2 . 1.218(3) ? C7 O1 . 1.323(3) ? C8 O3 . 1.255(3) ? C8 O4 . 1.266(3) ? D4 O1 . 1.021(3) ? D5 N1 2_545 1.151(3) ? N1 D5 2 1.151(3) ?