#------------------------------------------------------------------------------ #$Date: 2012-02-03 18:16:24 +0100 (Fri, 03 Feb 2012) $ #$Revision: 32112 $ #$URL: svn://www.crystallography.net/cod/cif/2/10/02/2100225.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2100225 loop_ _publ_author_name 'Edwards, David J.' 'Pritchard, Robin G.' 'Wallace, Timothy W.' _publ_section_title ; Fine-tuning of biaryl dihedral angles: structural characterization of five homologous three-atom bridged biphenyls by X-ray crystallography ; _journal_issue 3 _journal_name_full 'Acta Crystallographica Section B' _journal_page_first 335 _journal_page_last 345 _journal_volume 61 _journal_year 2005 _chemical_formula_moiety 'C20 H24 O7 S1' _chemical_formula_sum 'C20 H24 O7 S' _chemical_formula_weight 408.45 _chemical_name_systematic ; 5,7-dihydro-1,2,3,9,10,11-hexamethoxydibenzo[c,e]thiepine 6-oxide ; _space_group_IT_number 15 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-C 2yc' _symmetry_space_group_name_H-M 'C 1 2/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_conform_dict_name cif_core.dic _audit_conform_dict_version 2.2 _audit_creation_method 'WinGX routine CIF_UPDATE' _cell_angle_alpha 90 _cell_angle_beta 103.988(2) _cell_angle_gamma 90 _cell_formula_units_Z 4 _cell_length_a 8.8113(3) _cell_length_b 12.2699(3) _cell_length_c 17.5640(6) _cell_measurement_reflns_used 14600 _cell_measurement_temperature 150(2) _cell_measurement_theta_max 27.485 _cell_measurement_theta_min 0.998 _cell_volume 1842.60(10) _computing_cell_refinement 'HKL Scalepack (Otwinowski & Minor 1997)' _computing_data_collection 'Collect (Nonius BV, 1997-2000)' _computing_data_reduction 'HKL Denzo and Scalepack (Otwinowski & Minor 1997)' _computing_molecular_graphics 'Ortep-3 for Windows (Farrugia, 1997)' _computing_publication_material 'WinGX publication routines (Farrugia, 1999)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1997)' _diffrn_ambient_temperature 150(2) _diffrn_measured_fraction_theta_full 0.993 _diffrn_measured_fraction_theta_max 0.993 _diffrn_measurement_device '95mm CCD camera on \k-goniostat' _diffrn_measurement_device_type KappaCCD _diffrn_measurement_method 'CCD rotation images, thick slices' _diffrn_radiation_monochromator graphite _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.1095 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min -11 _diffrn_reflns_limit_k_max 15 _diffrn_reflns_limit_k_min -15 _diffrn_reflns_limit_l_max 22 _diffrn_reflns_limit_l_min -22 _diffrn_reflns_number 14844 _diffrn_reflns_reduction_process ; Scaled and merged with SORTAV R.H. Blessing, (1987) Cryst. Rev. 1, 3-58 R.H. Blessing, (1989) J. Appl. Cryst. 22, 396-397 ; _diffrn_reflns_theta_full 27.54 _diffrn_reflns_theta_max 27.54 _diffrn_reflns_theta_min 3.32 _exptl_absorpt_coefficient_mu 0.218 _exptl_absorpt_correction_T_max 1.033 _exptl_absorpt_correction_T_min 0.96 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details ; R.H. Blessing, Acta Cryst. (1995), A51, 33-38 ; _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.472 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 864 _exptl_crystal_size_max 0.2 _exptl_crystal_size_mid 0.2 _exptl_crystal_size_min 0.2 _refine_diff_density_max 0.296 _refine_diff_density_min -0.394 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.12 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 180 _refine_ls_number_reflns 2111 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.12 _refine_ls_R_factor_all 0.0594 _refine_ls_R_factor_gt 0.0482 _refine_ls_shift/su_max 0.006 _refine_ls_shift/su_mean 0 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0619P)^2^+1.7711P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1282 _refine_ls_wR_factor_ref 0.135 _reflns_number_gt 1775 _reflns_number_total 2111 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file sx5028.cif _[local]_cod_data_source_block sulfoxide _[local]_cod_cif_authors_sg_H-M 'C 2/c' _cod_database_code 2100225 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y, -z+1/2' 'x+1/2, y+1/2, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y, z-1/2' '-x+1/2, -y+1/2, -z' 'x+1/2, -y+1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol C1 0.1307(2) 0.16085(14) 0.33121(10) 0.0212(4) Uani d . 1 . . C C2 0.2817(2) 0.16099(14) 0.38027(10) 0.0219(4) Uani d . 1 . . C C3 0.3846(2) 0.24607(15) 0.37397(10) 0.0228(4) Uani d . 1 . . C C4 0.3340(2) 0.32981(14) 0.32078(10) 0.0221(4) Uani d . 1 . . C C4A 0.1828(2) 0.32929(14) 0.27266(10) 0.0209(4) Uani d . 1 . . C C5 0.1282(2) 0.42173(14) 0.21689(11) 0.0241(4) Uani d . 1 . . C C11B 0.08030(19) 0.24316(14) 0.27612(10) 0.0210(4) Uani d . 1 . . C C12 -0.0606(3) 0.1030(2) 0.39317(18) 0.0457(6) Uani d . 1 . . C C13 0.3584(3) 0.0963(2) 0.51153(12) 0.0368(5) Uani d . 1 . . C C14 0.6423(2) 0.31688(19) 0.40804(14) 0.0337(5) Uani d . 1 . . C O1 0.03009(15) 0.07741(10) 0.33878(7) 0.0246(3) Uani d . 1 . . O O2 0.32735(16) 0.07378(10) 0.42962(7) 0.0270(3) Uani d . 1 . . O O3 0.53039(14) 0.24138(11) 0.42333(7) 0.0287(3) Uani d . 1 . . O O6 0.0871(3) 0.5785(2) 0.31160(17) 0.0299(6) Uani d P 0.5 . . O S1 0 0.51860(5) 0.25 0.0332(2) Uani d S 1 . . S H4 0.401(3) 0.3897(18) 0.3150(13) 0.027(5) Uiso d . 1 . . H H5A 0.216(3) 0.4675(18) 0.2093(12) 0.028(5) Uiso d . 1 . . H H5B 0.070(3) 0.3939(18) 0.1668(13) 0.028(5) Uiso d . 1 . . H H12A -0.127(4) 0.039(3) 0.3966(17) 0.066(9) Uiso d . 1 . . H H12B -0.004(4) 0.111(3) 0.441(2) 0.085(12) Uiso d . 1 . . H H12C -0.112(4) 0.174(3) 0.382(2) 0.082(11) Uiso d . 1 . . H H13A 0.265(5) 0.128(3) 0.523(2) 0.090(12) Uiso d . 1 . . H H13B 0.456(4) 0.149(3) 0.526(2) 0.079(10) Uiso d . 1 . . H H13C 0.370(3) 0.030(2) 0.5379(15) 0.040(6) Uiso d . 1 . . H H14A 0.748(3) 0.298(2) 0.4450(15) 0.041(6) Uiso d . 1 . . H H14B 0.615(3) 0.390(2) 0.4154(16) 0.049(7) Uiso d . 1 . . H H14C 0.651(3) 0.308(2) 0.3549(16) 0.038(6) Uiso d . 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 C1 0.0197(8) 0.0197(8) 0.0242(9) -0.0013(6) 0.0051(7) -0.0024(6) C2 0.0229(9) 0.0203(8) 0.0216(8) 0.0026(7) 0.0038(7) 0.0003(6) C3 0.0164(8) 0.0256(8) 0.0249(9) 0.0007(7) 0.0022(7) -0.0026(7) C4 0.0185(8) 0.0218(8) 0.0256(9) -0.0013(7) 0.0047(7) -0.0011(7) C4A 0.0176(8) 0.0224(8) 0.0223(8) 0.0017(6) 0.0042(6) 0.0002(7) C5 0.0201(9) 0.0239(8) 0.0274(9) 0.0007(7) 0.0039(7) 0.0034(7) C11B 0.0177(9) 0.0217(8) 0.0226(8) 0.0016(6) 0.0031(7) -0.0022(6) C12 0.0459(14) 0.0396(13) 0.0619(17) -0.0165(11) 0.0332(13) -0.0159(11) C13 0.0491(14) 0.0359(11) 0.0246(10) 0.0063(10) 0.0073(9) 0.0057(8) C14 0.0175(9) 0.0410(12) 0.0398(12) -0.0031(8) 0.0014(8) 0.0095(9) O1 0.0230(7) 0.0216(6) 0.0295(7) -0.0037(5) 0.0069(5) -0.0003(5) O2 0.0307(7) 0.0224(7) 0.0247(7) 0.0024(5) 0.0003(5) 0.0027(5) O3 0.0176(7) 0.0322(7) 0.0318(7) -0.0027(5) -0.0026(5) 0.0066(5) O6 0.0215(13) 0.0262(13) 0.0417(15) -0.0076(10) 0.0070(11) -0.0150(11) S1 0.0210(3) 0.0208(3) 0.0577(5) 0 0.0093(3) 0 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag C1 O1 . 1.382(2) ? C1 C11B . 1.395(2) ? C1 C2 . 1.399(2) ? C2 O2 . 1.375(2) ? C2 C3 . 1.405(3) ? C3 O3 . 1.366(2) ? C3 C4 . 1.388(3) ? C4 C4A . 1.395(2) ? C4 H4 . 0.96(2) ? C4A C11B . 1.401(2) ? C4A C5 . 1.500(2) ? C5 S1 . 1.8289(19) ? C5 H5A . 0.99(2) ? C5 H5B . 0.97(2) ? C11B C11B 2 1.489(3) ? C12 O1 . 1.421(3) ? C12 H12A . 0.99(3) ? C12 H12B . 0.88(4) ? C12 H12C . 0.98(4) ? C13 O2 . 1.425(2) ? C13 H13A . 0.98(4) ? C13 H13B . 1.05(4) ? C13 H13C . 0.93(3) ? C14 O3 . 1.425(2) ? C14 H14A . 1.02(3) ? C14 H14B . 0.94(3) ? C14 H14C . 0.96(3) ? O6 S1 . 1.378(3) ? S1 O6 2 1.378(3) ? S1 C5 2 1.8289(19) ? loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0 0 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.006 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle O1 C1 C11B . . 119.94(15) O1 C1 C2 . . 118.59(15) C11B C1 C2 . . 121.47(16) O2 C2 C1 . . 118.48(15) O2 C2 C3 . . 122.16(16) C1 C2 C3 . . 119.23(16) O3 C3 C4 . . 123.96(16) O3 C3 C2 . . 116.40(15) C4 C3 C2 . . 119.63(16) C3 C4 C4A . . 120.62(16) C3 C4 H4 . . 122.0(13) C4A C4 H4 . . 117.3(13) C4 C4A C11B . . 120.56(16) C4 C4A C5 . . 120.05(16) C11B C4A C5 . . 119.39(15) C4A C5 S1 . . 114.13(13) C4A C5 H5A . . 112.2(12) S1 C5 H5A . . 103.8(13) C4A C5 H5B . . 110.1(13) S1 C5 H5B . . 106.5(13) H5A C5 H5B . . 109.8(18) C1 C11B C4A . . 118.41(15) C1 C11B C11B . 2 121.56(13) C4A C11B C11B . 2 119.99(13) O1 C12 H12A . . 107.5(18) O1 C12 H12B . . 113(3) H12A C12 H12B . . 104(3) O1 C12 H12C . . 112(2) H12A C12 H12C . . 118(3) H12B C12 H12C . . 103(3) O2 C13 H13A . . 109(2) O2 C13 H13B . . 108.3(19) H13A C13 H13B . . 113(3) O2 C13 H13C . . 107.8(15) H13A C13 H13C . . 104(3) H13B C13 H13C . . 115(3) O3 C14 H14A . . 107.3(14) O3 C14 H14B . . 112.3(17) H14A C14 H14B . . 111(2) O3 C14 H14C . . 109.2(15) H14A C14 H14C . . 109(2) H14B C14 H14C . . 109(2) C1 O1 C12 . . 112.31(15) C2 O2 C13 . . 116.20(15) C3 O3 C14 . . 116.12(14) O6 S1 O6 . 2 115.5(2) O6 S1 C5 . . 109.07(13) O6 S1 C5 2 . 111.52(13) O6 S1 C5 . 2 111.52(13) O6 S1 C5 2 2 109.07(13) C5 S1 C5 . 2 98.93(12) loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_4 _geom_torsion O1 C1 C2 O2 . 4.9(2) C11B C1 C2 O2 . -175.77(15) O1 C1 C2 C3 . -179.16(15) C11B C1 C2 C3 . 0.1(3) O2 C2 C3 O3 . -4.1(3) C1 C2 C3 O3 . -179.84(15) O2 C2 C3 C4 . 177.34(15) C1 C2 C3 C4 . 1.6(3) O3 C3 C4 C4A . -179.52(16) C2 C3 C4 C4A . -1.1(3) C3 C4 C4A C11B . -1.2(3) C3 C4 C4A C5 . 178.45(16) C4 C4A C5 S1 . -102.63(17) C11B C4A C5 S1 . 77.04(19) O1 C1 C11B C4A . 176.92(15) C2 C1 C11B C4A . -2.4(3) O1 C1 C11B C11B 2 -0.7(3) C2 C1 C11B C11B 2 180.00(17) C4 C4A C11B C1 . 2.9(3) C5 C4A C11B C1 . -176.77(16) C4 C4A C11B C11B 2 -179.43(17) C5 C4A C11B C11B 2 0.9(3) C11B C1 O1 C12 . -88.6(2) C2 C1 O1 C12 . 90.7(2) C1 C2 O2 C13 . -115.0(2) C3 C2 O2 C13 . 69.2(2) C4 C3 O3 C14 . -11.7(3) C2 C3 O3 C14 . 169.83(17) C4A C5 S1 O6 . 71.57(19) C4A C5 S1 O6 2 -159.66(17) C4A C5 S1 C5 2 -44.99(11)