#------------------------------------------------------------------------------ #$Date: 2011-09-10 05:16:28 +0200 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: svn://www.crystallography.net/cod/cif/2/2100215.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2100215 loop_ _publ_author_name 'Bertolasi, Valerio' 'Ferretti, Valeria' 'Pretto, Loretta' 'Fantin, Giancarlo' 'Fogagnolo, Marco' 'Bortolini, Olga' _publ_section_title ; Hydrogen-bonded aggregations of oxo-cholic acids ; _journal_issue 3 _journal_name_full 'Acta Crystallographica Section B' _journal_page_first 346 _journal_page_last 356 _journal_volume 61 _journal_year 2005 _chemical_formula_moiety 'C24 H36 O5' _chemical_formula_sum 'C24 H36 O5' _chemical_formula_weight 404.53 _chemical_name_systematic ; ? ; _space_group_IT_number 19 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall 'P 2ac 2ab' _symmetry_space_group_name_H-M 'P 21 21 21' _atom_sites_solution_hydrogens difmap _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 8.49530(10) _cell_length_b 12.7060(2) _cell_length_c 20.8011(3) _cell_measurement_reflns_used 3622 _cell_measurement_temperature 295 _cell_measurement_theta_max 30.0 _cell_measurement_theta_min 4.0 _cell_volume 2245.30(5) _computing_cell_refinement 'Denzo SMN (Otwinowski & Minor, 1997)' _computing_data_collection 'Kappa-CCD server software (Nonius, 1997)' _computing_data_reduction 'Denzo SMN (Otwinowski & Minor, 1997)' _computing_molecular_graphics 'ORTEP III (Burnett & Johnson, 1996)' _computing_publication_material ; SHELXL-97 (Sheldrick, 1997), PARST (Nardelli, 1995), PLATON (Spek, 1999) ; _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SIR97 (Altomare et al., 1999)' _diffrn_ambient_temperature 295 _diffrn_measured_fraction_theta_full 0.992 _diffrn_measured_fraction_theta_max 0.992 _diffrn_measurement_device_type 'Nonius Kappa CCD' _diffrn_measurement_method '\f scans and \w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0350 _diffrn_reflns_av_sigmaI/netI 0.0233 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min -11 _diffrn_reflns_limit_k_max 17 _diffrn_reflns_limit_k_min -17 _diffrn_reflns_limit_l_max 29 _diffrn_reflns_limit_l_min -29 _diffrn_reflns_number 26164 _diffrn_reflns_theta_full 30.03 _diffrn_reflns_theta_max 30.0 _diffrn_reflns_theta_min 4.0 _exptl_absorpt_coefficient_mu 0.082 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.197 _exptl_crystal_density_method 'not measured' _exptl_crystal_description Prism _exptl_crystal_F_000 880 _exptl_crystal_size_max 0.45 _exptl_crystal_size_mid 0.35 _exptl_crystal_size_min 0.32 _refine_diff_density_max 0.452 _refine_diff_density_min -0.321 _refine_ls_abs_structure_details 'Flack H D (1983), Acta Cryst. A39, 876-881' _refine_ls_abs_structure_Flack -0.3(15) _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.056 _refine_ls_hydrogen_treatment refall _refine_ls_matrix_type full _refine_ls_number_parameters 406 _refine_ls_number_reflns 3664 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.056 _refine_ls_R_factor_all 0.0579 _refine_ls_R_factor_gt 0.0495 _refine_ls_shift/su_max 0.009 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0967P)^2^+0.2322P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1372 _refine_ls_wR_factor_ref 0.1462 _reflns_number_gt 3189 _reflns_number_total 3664 _reflns_threshold_expression I>2sigma(I) _[local]_cod_data_source_file sn5016.cif _[local]_cod_data_source_block (IV-alpha) _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2100215 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' 'x+1/2, -y+1/2, -z' '-x, y+1/2, -z+1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_occupancy _atom_site_type_symbol C1 -0.0476(3) 0.0840(2) 0.09477(11) 0.0472(5) Uani d 1 C C2 -0.2061(3) 0.1052(2) 0.12646(13) 0.0541(6) Uani d 1 C C3 -0.2663(3) 0.2126(3) 0.10838(12) 0.0548(6) Uani d 1 C C4 -0.1503(3) 0.2999(2) 0.11661(13) 0.0528(6) Uani d 1 C C5 0.0102(3) 0.2751(2) 0.08602(10) 0.0438(5) Uani d 1 C C6 0.1239(3) 0.3673(2) 0.09973(13) 0.0527(6) Uani d 1 C C7 0.1644(3) 0.36698(17) 0.17024(11) 0.0412(4) Uani d 1 C C8 0.2422(2) 0.26719(15) 0.19326(9) 0.0332(4) Uani d 1 C C9 0.1270(2) 0.17386(15) 0.17969(8) 0.0316(3) Uani d 1 C C10 0.0794(2) 0.16743(18) 0.10744(9) 0.0381(4) Uani d 1 C C11 0.1927(3) 0.06965(15) 0.20612(9) 0.0363(4) Uani d 1 C C12 0.2444(2) 0.07523(14) 0.27686(8) 0.0323(4) Uani d 1 C C13 0.3626(2) 0.16506(13) 0.28733(8) 0.0298(3) Uani d 1 C C14 0.2854(2) 0.26884(14) 0.26447(8) 0.0312(4) Uani d 1 C C15 0.3989(3) 0.35427(16) 0.28795(12) 0.0441(5) Uani d 1 C C16 0.4646(3) 0.31082(17) 0.35148(12) 0.0471(5) Uani d 1 C C17 0.4041(2) 0.19527(14) 0.35805(9) 0.0317(4) Uani d 1 C C18 0.5152(3) 0.14028(19) 0.25028(11) 0.0398(4) Uani d 1 C C19 0.2208(3) 0.1395(3) 0.06451(11) 0.0531(6) Uani d 1 C C20 0.5209(3) 0.12555(16) 0.39534(10) 0.0370(4) Uani d 1 C C21 0.4644(4) 0.01176(18) 0.40226(11) 0.0506(6) Uani d 1 C C22 0.5581(3) 0.1717(2) 0.46237(10) 0.0423(5) Uani d 1 C C23 0.4158(3) 0.1829(3) 0.50623(11) 0.0555(6) Uani d 1 C C24 0.4543(4) 0.2252(3) 0.57183(13) 0.0617(7) Uani d 1 C O25 -0.3978(2) 0.2283(3) 0.08818(13) 0.0812(8) Uani d 1 O O26 0.1104(2) 0.09003(13) 0.31787(7) 0.0417(3) Uani d 1 O O27 0.4346(7) 0.1806(3) 0.62092(13) 0.1301(18) Uani d 1 O O28 0.5105(3) 0.32179(19) 0.56985(11) 0.0726(6) Uani d 1 O O29 0.1281(3) 0.43893(13) 0.20588(9) 0.0564(5) Uani d 1 O H1A -0.016(4) 0.023(2) 0.1072(14) 0.047(8) Uiso d 1 H H1B -0.064(4) 0.081(3) 0.0449(16) 0.065(9) Uiso d 1 H H2A -0.189(5) 0.108(3) 0.1786(19) 0.076(10) Uiso d 1 H H2B -0.288(6) 0.059(3) 0.113(2) 0.092(13) Uiso d 1 H H4A -0.145(4) 0.312(2) 0.1636(14) 0.046(7) Uiso d 1 H H4B -0.195(5) 0.366(3) 0.0975(19) 0.078(11) Uiso d 1 H H5 0.004(3) 0.2680(19) 0.0388(11) 0.034(6) Uiso d 1 H H6A 0.230(6) 0.351(4) 0.072(2) 0.091(13) Uiso d 1 H H6B 0.078(5) 0.433(3) 0.0840(19) 0.081(11) Uiso d 1 H H8 0.331(3) 0.258(2) 0.1710(13) 0.037(6) Uiso d 1 H H9 0.034(4) 0.187(2) 0.2040(13) 0.045(7) Uiso d 1 H H11A 0.282(4) 0.047(2) 0.1781(14) 0.045(7) Uiso d 1 H H11B 0.116(4) 0.017(2) 0.2000(13) 0.044(7) Uiso d 1 H H12 0.295(3) 0.010(2) 0.2884(12) 0.036(6) Uiso d 1 H H14 0.187(3) 0.2826(19) 0.2877(11) 0.030(5) Uiso d 1 H H15A 0.488(4) 0.360(2) 0.2529(15) 0.049(7) Uiso d 1 H H15B 0.347(5) 0.416(3) 0.2883(17) 0.073(10) Uiso d 1 H H16A 0.429(4) 0.345(3) 0.3921(16) 0.058(8) Uiso d 1 H H16B 0.585(5) 0.310(3) 0.3502(17) 0.076(11) Uiso d 1 H H17 0.309(3) 0.2094(19) 0.3817(11) 0.029(5) Uiso d 1 H H18A 0.589(4) 0.192(2) 0.2587(13) 0.040(6) Uiso d 1 H H18B 0.557(4) 0.080(3) 0.2612(15) 0.060(9) Uiso d 1 H H18C 0.497(4) 0.132(3) 0.2011(16) 0.063(9) Uiso d 1 H H19A 0.313(5) 0.178(3) 0.0743(19) 0.076(11) Uiso d 1 H H19B 0.245(4) 0.073(3) 0.0677(17) 0.063(10) Uiso d 1 H H19C 0.179(5) 0.147(3) 0.0209(17) 0.067(9) Uiso d 1 H H20 0.621(3) 0.132(2) 0.3723(12) 0.039(6) Uiso d 1 H H21A 0.359(4) 0.011(2) 0.4173(14) 0.047(7) Uiso d 1 H H21B 0.454(4) -0.023(2) 0.3597(15) 0.057(8) Uiso d 1 H H21C 0.521(5) -0.033(3) 0.4342(19) 0.080(11) Uiso d 1 H H22A 0.640(3) 0.125(2) 0.4790(12) 0.035(6) Uiso d 1 H H22B 0.609(5) 0.233(3) 0.4546(17) 0.065(9) Uiso d 1 H H23A 0.335(5) 0.234(3) 0.4856(18) 0.073(11) Uiso d 1 H H23B 0.351(10) 0.117(5) 0.506(3) 0.15(2) Uiso d 1 H H26 0.031(5) 0.058(3) 0.3046(19) 0.078(11) Uiso d 1 H H28 0.545(5) 0.330(3) 0.615(2) 0.077(11) Uiso d 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 C1 0.0431(11) 0.0597(14) 0.0389(10) -0.0059(11) -0.0065(9) -0.0069(10) C2 0.0426(12) 0.0700(16) 0.0497(12) -0.0132(12) -0.0016(10) 0.0047(11) C3 0.0345(11) 0.0832(18) 0.0466(11) -0.0005(12) 0.0014(9) 0.0114(12) C4 0.0405(11) 0.0628(15) 0.0552(13) 0.0078(11) -0.0063(10) 0.0060(11) C5 0.0385(10) 0.0585(12) 0.0345(9) -0.0010(10) -0.0042(8) 0.0085(8) C6 0.0518(13) 0.0568(14) 0.0494(12) -0.0081(11) -0.0107(11) 0.0209(11) C7 0.0370(9) 0.0396(10) 0.0470(10) -0.0024(8) -0.0059(8) 0.0107(8) C8 0.0327(9) 0.0334(8) 0.0336(8) 0.0018(7) -0.0007(7) 0.0020(7) C9 0.0321(8) 0.0356(8) 0.0271(7) -0.0003(7) 0.0015(7) -0.0025(6) C10 0.0341(9) 0.0528(11) 0.0274(7) 0.0001(8) 0.0009(7) -0.0013(8) C11 0.0452(10) 0.0321(8) 0.0317(8) 0.0003(8) -0.0038(8) -0.0065(7) C12 0.0408(9) 0.0262(8) 0.0300(7) -0.0013(7) -0.0007(7) -0.0032(6) C13 0.0333(8) 0.0259(7) 0.0303(7) 0.0024(6) -0.0007(7) -0.0019(6) C14 0.0333(9) 0.0261(7) 0.0342(8) 0.0006(7) -0.0030(7) -0.0021(6) C15 0.0518(12) 0.0273(8) 0.0531(11) -0.0052(8) -0.0105(11) 0.0009(8) C16 0.0539(13) 0.0335(9) 0.0540(12) -0.0089(9) -0.0158(11) -0.0024(9) C17 0.0324(9) 0.0286(8) 0.0342(8) 0.0020(7) -0.0048(7) -0.0039(6) C18 0.0353(10) 0.0420(10) 0.0420(9) 0.0079(9) 0.0047(8) -0.0022(8) C19 0.0426(12) 0.0830(19) 0.0337(9) 0.0034(13) 0.0064(9) -0.0115(11) C20 0.0358(9) 0.0402(10) 0.0349(8) 0.0063(8) -0.0044(8) -0.0021(7) C21 0.0720(18) 0.0387(10) 0.0413(10) 0.0065(11) -0.0145(12) 0.0003(9) C22 0.0352(10) 0.0502(12) 0.0415(10) 0.0032(9) -0.0115(8) -0.0061(9) C23 0.0443(12) 0.0807(18) 0.0414(11) 0.0043(13) -0.0078(10) -0.0198(12) C24 0.0687(17) 0.0679(16) 0.0484(12) 0.0124(15) -0.0148(13) -0.0142(11) O25 0.0368(9) 0.119(2) 0.0877(15) -0.0061(12) -0.0120(10) 0.0315(15) O26 0.0439(8) 0.0446(8) 0.0367(6) -0.0153(7) 0.0049(6) -0.0086(6) O27 0.237(5) 0.098(2) 0.0557(13) -0.031(3) -0.033(2) -0.0001(13) O28 0.0904(17) 0.0728(13) 0.0546(10) -0.0029(13) -0.0162(11) -0.0093(9) O29 0.0647(11) 0.0397(8) 0.0649(10) 0.0153(8) -0.0139(9) 0.0029(7) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C2 C1 C10 115.2(2) C2 C1 H1A 108(2) C10 C1 H1A 110(2) C2 C1 H1B 109(2) C10 C1 H1B 107(2) H1A C1 H1B 108(3) C3 C2 C1 110.6(2) C3 C2 H2A 105(2) C1 C2 H2A 109(2) C3 C2 H2B 104(3) C1 C2 H2B 115(3) H2A C2 H2B 113(4) O25 C3 C4 121.7(3) O25 C3 C2 123.4(3) C4 C3 C2 114.9(2) C3 C4 C5 112.7(2) C3 C4 H4A 104.8(17) C5 C4 H4A 113.5(18) C3 C4 H4B 109(2) C5 C4 H4B 110(2) H4A C4 H4B 106(3) C4 C5 C6 108.8(2) C4 C5 C10 113.39(19) C6 C5 C10 112.23(18) C4 C5 H5 112.5(15) C6 C5 H5 106.6(15) C10 C5 H5 103.0(14) C7 C6 C5 108.70(19) C7 C6 H6A 109(2) C5 C6 H6A 106(2) C7 C6 H6B 115(2) C5 C6 H6B 110(3) H6A C6 H6B 108(3) O29 C7 C6 122.2(2) O29 C7 C8 123.3(2) C6 C7 C8 114.3(2) C7 C8 C14 113.70(17) C7 C8 C9 107.83(15) C14 C8 C9 109.64(15) C7 C8 H8 108.3(17) C14 C8 H8 107.7(17) C9 C8 H8 109.7(17) C11 C9 C10 113.18(15) C11 C9 C8 111.18(15) C10 C9 C8 112.10(15) C11 C9 H9 105.2(17) C10 C9 H9 107.7(17) C8 C9 H9 107.0(16) C1 C10 C19 106.9(2) C1 C10 C5 107.00(19) C19 C10 C5 109.4(2) C1 C10 C9 112.58(17) C19 C10 C9 111.68(17) C5 C10 C9 109.17(17) C12 C11 C9 113.96(15) C12 C11 H11A 110.7(16) C9 C11 H11A 108.6(16) C12 C11 H11B 111.1(16) C9 C11 H11B 108.3(17) H11A C11 H11B 104(2) O26 C12 C13 109.68(14) O26 C12 C11 110.40(17) C13 C12 C11 110.90(15) O26 C12 H12 108.6(15) C13 C12 H12 108.2(16) C11 C12 H12 109.0(15) C12 C13 C18 109.11(15) C12 C13 C14 108.24(15) C18 C13 C14 112.13(16) C12 C13 C17 117.67(15) C18 C13 C17 109.35(16) C14 C13 C17 100.12(13) C8 C14 C15 118.07(17) C8 C14 C13 112.85(14) C15 C14 C13 103.85(15) C8 C14 H14 106.1(14) C15 C14 H14 104.6(14) C13 C14 H14 111.1(14) C14 C15 C16 104.37(16) C14 C15 H15A 106.5(17) C16 C15 H15A 110.9(17) C14 C15 H15B 108(3) C16 C15 H15B 119(2) H15A C15 H15B 107(3) C15 C16 C17 107.06(16) C15 C16 H16A 118(2) C17 C16 H16A 103.5(19) C15 C16 H16B 110(2) C17 C16 H16B 109(2) H16A C16 H16B 109(3) C20 C17 C13 118.62(15) C20 C17 C16 111.89(16) C13 C17 C16 102.91(15) C20 C17 H17 113.0(14) C13 C17 H17 109.7(14) C16 C17 H17 98.4(14) C13 C18 H18A 109.1(17) C13 C18 H18B 113(2) H18A C18 H18B 107(3) C13 C18 H18C 113(2) H18A C18 H18C 111(3) H18B C18 H18C 103(3) C10 C19 H19A 114(2) C10 C19 H19B 111(3) H19A C19 H19B 107(4) C10 C19 H19C 103(2) H19A C19 H19C 117(3) H19B C19 H19C 104(3) C21 C20 C17 112.88(18) C21 C20 C22 109.74(18) C17 C20 C22 111.60(16) C21 C20 H20 113.5(16) C17 C20 H20 105.2(15) C22 C20 H20 103.4(16) C20 C21 H21A 109.8(18) C20 C21 H21B 111.1(19) H21A C21 H21B 102(3) C20 C21 H21C 117(2) H21A C21 H21C 103(3) H21B C21 H21C 113(3) C23 C22 C20 114.44(18) C23 C22 H22A 114.3(15) C20 C22 H22A 103.5(15) C23 C22 H22B 114(2) C20 C22 H22B 105(2) H22A C22 H22B 104(3) C24 C23 C22 113.9(2) C24 C23 H23A 107(2) C22 C23 H23A 110(2) C24 C23 H23B 115(3) C22 C23 H23B 111(4) H23A C23 H23B 99(5) O27 C24 O28 121.7(3) O27 C24 C23 125.6(3) O28 C24 C23 112.6(3) C12 O26 H26 112(3) C24 O28 H28 101(2) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance C1 C2 1.523(4) C1 C10 1.536(3) C1 H1A 0.86(3) C1 H1B 1.05(3) C2 C3 1.505(4) C2 H2A 1.09(4) C2 H2B 0.95(5) C3 O25 1.210(3) C3 C4 1.493(4) C4 C5 1.538(3) C4 H4A 0.99(3) C4 H4B 1.00(4) C5 C6 1.545(4) C5 C10 1.554(3) C5 H5 0.99(2) C6 C7 1.507(3) C6 H6A 1.09(5) C6 H6B 0.98(4) C7 O29 1.217(3) C7 C8 1.508(3) C8 C14 1.526(2) C8 C9 1.563(3) C8 H8 0.89(3) C9 C11 1.538(3) C9 C10 1.559(2) C9 H9 0.96(3) C10 C19 1.538(3) C11 C12 1.537(2) C11 H11A 1.00(3) C11 H11B 0.94(3) C12 O26 1.435(3) C12 C13 1.536(3) C12 H12 0.96(3) C13 C18 1.541(3) C13 C14 1.547(2) C13 C17 1.561(2) C14 C15 1.532(3) C14 H14 0.98(3) C15 C16 1.537(3) C15 H15A 1.06(3) C15 H15B 0.90(4) C16 C17 1.561(3) C16 H16A 0.99(3) C16 H16B 1.02(4) C17 C20 1.540(3) C17 H17 0.96(2) C18 H18A 0.92(3) C18 H18B 0.88(4) C18 H18C 1.04(3) C19 H19A 0.95(5) C19 H19B 0.87(4) C19 H19C 0.98(4) C20 C21 1.530(3) C20 C22 1.545(3) C20 H20 0.98(3) C21 H21A 0.95(3) C21 H21B 0.99(3) C21 H21C 1.00(4) C22 C23 1.522(4) C22 H22A 0.98(3) C22 H22B 0.90(4) C23 C24 1.503(3) C23 H23A 1.03(4) C23 H23B 1.00(7) C24 O27 1.180(4) C24 O28 1.317(4) O26 H26 0.84(4) O28 H28 0.98(4)