#------------------------------------------------------------------------------ #$Date: 2010-01-30 14:59:17 +0100 (Sat, 30 Jan 2010) $ #$Revision: 966 $ #$URL: svn://www.crystallography.net/cod/cif/2/2012676.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_2012676 _journal_name_full 'Acta Crystallographica, Section C' _journal_year 2002 _journal_volume 58 _journal_page_first o280 _journal_page_last o281 _publ_section_title ; 5,5-Dimethyl-2-[6-methyl-2-(methylsulfanyl)pyrimidin-4-yloxy]- 1,3,2-dioxaphosphorinane-2-thione ; _space_group_IT_number 14 _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _[local]_cod_cif_authors_sg_H-M 'P 21/c' _[local]_cod_cif_authors_sg_Hall -P_2ybc loop_ _publ_author_name 'Pop, Mihaela' 'Borodi, Gheorghe' 'Goubitz, Kees' "Peschar, Ren\'e" 'Fraanje, Jan' 'Fenesan, Ioan' 'Schenk, Henk' _chemical_formula_moiety 'C11 H17 N2 O3 P S2' _chemical_formula_sum 'C11 H17 N2 O3 P S2' _chemical_formula_weight 320.36 _symmetry_cell_setting 'monoclinic' loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' _cell_length_a 9.900(2) _cell_length_b 9.330(2) _cell_length_c 17.010(3) _cell_angle_alpha 90 _cell_angle_beta 90.23(2) _cell_angle_gamma 90 _cell_volume 1571.2(5) _cell_formula_units_Z 4 _cell_measurement_temperature 293(2) _exptl_crystal_density_diffrn 1.354 _diffrn_ambient_temperature 293 loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol S1 0.50695(10) 0.27240(12) 0.02876(5) 0.0789(3) Uani d . 1 . . S S2 1.15227(8) 0.29194(7) -0.12452(5) 0.0601(3) Uani d . 1 . . S P1 0.63259(6) 0.20343(6) 0.10651(3) 0.0426(2) Uani d . 1 . . P O1 0.59314(19) 0.05838(18) 0.13681(10) 0.0499(5) Uani d . 1 . . O O2 0.6484(2) 0.29258(17) 0.18254(10) 0.0525(5) Uani d . 1 . . O O3 0.79901(19) 0.1961(2) 0.08193(10) 0.0506(5) Uani d . 1 . . O N1 0.9551(2) 0.2350(2) -0.01586(11) 0.0413(4) Uani d . 1 . . N N2 0.9768(2) 0.0878(2) -0.12732(11) 0.0443(5) Uani d . 1 . . N C1 0.6699(3) 0.0057(3) 0.20605(15) 0.0514(6) Uani d . 1 . . C H11 0.6356 -0.0879 0.2206 0.062 Uiso calc R 1 . . H H12 0.7639 -0.0057 0.1915 0.062 Uiso calc R 1 . . H C2 0.6620(3) 0.1019(3) 0.27525(13) 0.0439(5) Uani d . 1 . . C C3 0.7234(3) 0.2374(3) 0.25065(15) 0.0519(6) Uani d . 1 . . C H31 0.8172 0.2221 0.2368 0.062 Uiso calc R 1 . . H H32 0.7201 0.3062 0.2934 0.062 Uiso calc R 1 . . H C4 0.8506(2) 0.1555(3) 0.00940(13) 0.0405(5) Uani d . 1 . . C C5 0.8019(3) 0.0422(3) -0.02909(15) 0.0467(6) Uani d . 1 . . C H5 0.7287 -0.0111 -0.0112 0.056 Uiso calc R 1 . . H C6 0.8707(2) 0.0101(3) -0.09910(14) 0.0446(5) Uani d . 1 . . C C7 1.0128(2) 0.1962(2) -0.08401(13) 0.0411(5) Uani d . 1 . . C C8 0.5069(3) 0.1200(3) 0.30306(17) 0.0566(7) Uani d . 1 . . C H81 0.5027 0.1871 0.3458 0.085 Uiso calc R 1 . . H H82 0.4724 0.0290 0.3200 0.085 Uiso calc R 1 . . H H83 0.4534 0.1549 0.2599 0.085 Uiso calc R 1 . . H C9 0.7536(4) 0.0437(4) 0.3418(2) 0.0765(10) Uani d . 1 . . C H91 0.8444 0.0344 0.3229 0.115 Uiso calc R 1 . . H H92 0.7210 -0.0483 0.3585 0.115 Uiso calc R 1 . . H H93 0.7522 0.1090 0.3854 0.115 Uiso calc R 1 . . H C10 0.8316(3) -0.1128(4) -0.1458(2) 0.0676(8) Uani d . 1 . . C H101 0.8286 -0.0862 -0.2004 0.101 Uiso calc R 1 . . H H102 0.7439 -0.1452 -0.1297 0.101 Uiso calc R 1 . . H H103 0.8962 -0.1883 -0.1385 0.101 Uiso calc R 1 . . H C11 1.1717(4) 0.4290(3) -0.0566(2) 0.0749(10) Uani d . 1 . . C H111 1.0992 0.4966 -0.0626 0.112 Uiso calc R 1 . . H H112 1.2563 0.4766 -0.0653 0.112 Uiso calc R 1 . . H H113 1.1703 0.3899 -0.0044 0.112 Uiso calc R 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 S1 0.0765(6) 0.1059(7) 0.0545(4) 0.0255(5) 0.0013(4) 0.0224(4) S2 0.0704(5) 0.0480(4) 0.0623(4) -0.0066(3) 0.0303(4) -0.0028(3) P1 0.0525(4) 0.0401(3) 0.0352(3) -0.0003(2) 0.0082(2) 0.0018(2) O1 0.0707(12) 0.0371(8) 0.0420(9) -0.0136(8) 0.0056(8) -0.0069(7) O2 0.0845(13) 0.0286(8) 0.0445(9) -0.0027(8) 0.0128(9) -0.0006(6) O3 0.0556(10) 0.0607(11) 0.0356(8) -0.0061(8) 0.0103(7) -0.0027(7) N1 0.0487(11) 0.0373(9) 0.0380(10) 0.0036(8) 0.0064(8) 0.0028(7) N2 0.0496(11) 0.0435(10) 0.0399(10) 0.0053(8) 0.0018(8) 0.0001(8) C1 0.0703(17) 0.0319(11) 0.0519(14) 0.0010(11) 0.0079(12) 0.0001(10) C2 0.0549(14) 0.0396(11) 0.0371(11) -0.0041(10) 0.0012(10) 0.0025(9) C3 0.0669(16) 0.0429(13) 0.0459(13) -0.0167(12) 0.0012(12) -0.0056(10) C4 0.0442(12) 0.0432(11) 0.0340(10) 0.0054(9) 0.0017(9) 0.0048(9) C5 0.0492(13) 0.0478(13) 0.0432(12) -0.0039(10) 0.0034(10) 0.0045(10) C6 0.0478(13) 0.0449(12) 0.0410(11) 0.0027(10) -0.0049(10) -0.0004(10) C7 0.0480(12) 0.0363(11) 0.0391(11) 0.0070(9) 0.0034(9) 0.0051(9) C8 0.0670(17) 0.0551(15) 0.0479(14) -0.0059(13) 0.0168(12) 0.0008(11) C9 0.094(2) 0.077(2) 0.0583(17) 0.0038(19) -0.0166(17) 0.0156(16) C10 0.0710(19) 0.0692(19) 0.0625(17) -0.0128(15) -0.0033(15) -0.0192(15) C11 0.083(2) 0.0472(15) 0.095(2) -0.0125(15) 0.0310(19) -0.0128(16) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag S1 P1 . 1.9227(10) ? S2 C11 . 1.734(3) ? S2 C7 . 1.785(3) ? P1 O1 . 1.5004(18) ? P1 O2 . 1.5452(18) ? P1 O3 . 1.7028(19) ? O1 C1 . 1.483(3) ? O2 C3 . 1.467(3) ? O3 C4 . 1.390(3) ? N1 C7 . 1.344(3) ? N1 C4 . 1.344(3) ? N2 C7 . 1.300(3) ? N2 C6 . 1.365(3) ? C1 C2 . 1.482(3) ? C1 H11 . 0.9700 ? C1 H12 . 0.9700 ? C2 C3 . 1.465(3) ? C2 C9 . 1.546(4) ? C2 C8 . 1.617(4) ? C3 H31 . 0.9700 ? C3 H32 . 0.9700 ? C4 C5 . 1.333(4) ? C5 C6 . 1.407(3) ? C5 H5 . 0.9300 ? C6 C10 . 1.447(4) ? C8 H81 . 0.9600 ? C8 H82 . 0.9600 ? C8 H83 . 0.9600 ? C9 H91 . 0.9600 ? C9 H92 . 0.9600 ? C9 H93 . 0.9600 ? C10 H101 . 0.9600 ? C10 H102 . 0.9600 ? C10 H103 . 0.9600 ? C11 H111 . 0.9600 ? C11 H112 . 0.9600 ? C11 H113 . 0.9600 ? _cod_database_code 2012676