#------------------------------------------------------------------------------ #$Date: 2011-09-10 05:16:28 +0200 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: svn://www.crystallography.net/cod/cif/2/2009077.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2009077 loop_ _publ_author_name 'Tian, Y.-P.' 'Yu, W.-T.' 'Jiang, M.-H.' 'Shanmuga Sundara Raj, S.' 'Yang, P.' 'Fun, H.-K.' _publ_section_title ; Diiodobis(4-methoxybenzaldehyde thiosemicarbazone-S)cadmium(II) ; _journal_issue 10 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 1639 _journal_page_last 1641 _journal_volume 55 _journal_year 1999 _chemical_formula_iupac '[Cd I2(C9 H11 N3 O S)2]' _chemical_formula_sum 'C18 H22 Cd I2 N6 O2 S2' _chemical_formula_weight 784.74 _chemical_name_systematic ; Diiodobis(4-methoxybenzaldehyde thiosemicarbazone)cadmium(II) ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 111.160(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 14.02680(10) _cell_length_b 15.0988(2) _cell_length_c 13.3565(2) _cell_measurement_reflns_used 8192 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 33.21 _cell_measurement_theta_min 2.96 _cell_volume 2638.02(19) _computing_cell_refinement 'SAINT (Siemens, 1996)' _computing_data_collection 'SMART (Siemens, 1996)' _computing_data_reduction SAINT _computing_molecular_graphics SHELXTL _computing_publication_material 'SHELXTL and PLATON (Spek, 1990)' _computing_structure_refinement SHELXTL _computing_structure_solution 'SHELXTL (Sheldrick, 1997)' _diffrn_ambient_temperature 293(2) _diffrn_detector_area_resol_mean 8.33 _diffrn_measured_fraction_theta_full 0.986 _diffrn_measured_fraction_theta_max 0.986 _diffrn_measurement_device_type 'Siemens SMART CCD area-detector' _diffrn_measurement_method '\w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.026 _diffrn_reflns_av_sigmaI/netI 0.031 _diffrn_reflns_limit_h_max 17 _diffrn_reflns_limit_h_min -17 _diffrn_reflns_limit_k_max 19 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 17 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 16220 _diffrn_reflns_theta_full 27.50 _diffrn_reflns_theta_max 27.5 _diffrn_reflns_theta_min 2.96 _exptl_absorpt_coefficient_mu 3.352 _exptl_absorpt_correction_T_max 0.366 _exptl_absorpt_correction_T_min 0.250 _exptl_absorpt_correction_type empirical _exptl_absorpt_process_details '(SADABS; Sheldrick, 1996)' _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.976 _exptl_crystal_density_method 'not measured' _exptl_crystal_description parallelepiped _exptl_crystal_F_000 1496 _exptl_crystal_size_max 0.48 _exptl_crystal_size_mid 0.44 _exptl_crystal_size_min 0.30 _refine_diff_density_max 1.037 _refine_diff_density_min -1.568 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.149 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 280 _refine_ls_number_reflns 5978 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.149 _refine_ls_R_factor_all 0.042 _refine_ls_R_factor_gt 0.037 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0302P)^2^+4.3508P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref 0.090 _reflns_number_gt 5370 _reflns_number_total 5978 _reflns_threshold_expression 'I > 2\s(I)' _[local]_cod_data_source_file sk1305.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M 'P 21/c' _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_original_cell_volume 2638.02(6) _cod_database_code 2009077 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol Cd1 0.42157(2) 0.721008(19) 0.72666(2) 0.03963(8) Uani d . 1 Cd I1 0.58860(2) 0.628970(18) 0.72132(2) 0.04802(9) Uani d . 1 I I2 0.26804(3) 0.62151(2) 0.74370(3) 0.05813(10) Uani d . 1 I S1 0.35362(7) 0.82196(7) 0.55920(8) 0.0415(2) Uani d . 1 S S2 0.48263(7) 0.83943(6) 0.87550(7) 0.03730(19) Uani d . 1 S O1 1.0931(2) 0.9790(2) 0.6718(3) 0.0678(10) Uani d . 1 O O2 -0.0050(3) 1.2315(2) 1.1131(3) 0.0612(8) Uani d . 1 O N1 0.6292(2) 0.8796(2) 0.5674(3) 0.0405(7) Uani d . 1 N N2 0.5372(2) 0.8369(2) 0.5492(3) 0.0411(7) Uani d . 1 N H2B 0.5257 0.7856 0.5191 0.049 Uiso calc R 1 H N3 0.4867(3) 0.9565(2) 0.6208(3) 0.0539(9) Uani d . 1 N H3B 0.5437 0.9820 0.6282 0.065 Uiso calc R 1 H H3C 0.4423 0.9832 0.6406 0.065 Uiso calc R 1 H N4 0.2810(2) 0.9787(2) 0.9491(3) 0.0407(7) Uani d . 1 N N5 0.3672(2) 0.9310(2) 0.9538(3) 0.0400(7) Uani d . 1 N H5B 0.4186 0.9275 1.0132 0.048 Uiso calc R 1 H N6 0.2894(2) 0.8949(2) 0.7773(3) 0.0448(8) Uani d . 1 N H6B 0.2359 0.9234 0.7761 0.054 Uiso calc R 1 H H6C 0.2902 0.8691 0.7202 0.054 Uiso calc R 1 H C1 0.8012(3) 0.8727(3) 0.5773(3) 0.0407(8) Uani d . 1 C C2 0.8135(3) 0.9648(3) 0.5800(4) 0.0480(10) Uani d . 1 C H2A 0.7563 1.0012 0.5615 0.058 Uiso calc R 1 H C3 0.9099(3) 1.0023(3) 0.6097(4) 0.0512(10) Uani d . 1 C H3A 0.9175 1.0635 0.6105 0.061 Uiso calc R 1 H C4 0.9947(3) 0.9478(3) 0.6382(4) 0.0462(9) Uani d . 1 C C5 0.9831(3) 0.8562(3) 0.6324(4) 0.0526(11) Uani d . 1 C H5A 1.0402 0.8197 0.6490 0.063 Uiso calc R 1 H C6 0.8872(3) 0.8198(3) 0.6022(4) 0.0479(10) Uani d . 1 C H6A 0.8799 0.7586 0.5982 0.057 Uiso calc R 1 H C7 0.7008(3) 0.8339(3) 0.5563(3) 0.0436(9) Uani d . 1 C H7A 0.6890 0.7752 0.5345 0.052 Uiso calc R 1 H C8 0.4674(3) 0.8759(2) 0.5787(3) 0.0357(7) Uani d . 1 C C9 1.1084(4) 1.0726(4) 0.6739(6) 0.0773(18) Uani d . 1 C H9A 1.1803 1.0852 0.6989 0.116 Uiso calc R 1 H H9B 1.0790 1.0994 0.7213 0.116 Uiso calc R 1 H H9C 1.0760 1.0962 0.6028 0.116 Uiso calc R 1 H C10 0.2115(3) 1.0789(3) 1.0455(3) 0.0392(8) Uani d . 1 C C11 0.1091(3) 1.0708(3) 0.9809(3) 0.0446(9) Uani d . 1 C H11A 0.0903 1.0314 0.9236 0.054 Uiso calc R 1 H C12 0.0342(3) 1.1205(3) 1.0003(4) 0.0479(10) Uani d . 1 C H12A -0.0340 1.1143 0.9563 0.057 Uiso calc R 1 H C13 0.0620(3) 1.1796(3) 1.0859(4) 0.0452(9) Uani d . 1 C C14 0.1645(3) 1.1906(3) 1.1497(4) 0.0505(10) Uani d . 1 C H14A 0.1834 1.2321 1.2049 0.061 Uiso calc R 1 H C15 0.2380(3) 1.1395(3) 1.1309(3) 0.0490(10) Uani d . 1 C H15A 0.3061 1.1454 1.1755 0.059 Uiso calc R 1 H C16 0.2925(3) 1.0252(3) 1.0328(3) 0.0407(8) Uani d . 1 C H16A 0.3559 1.0247 1.0883 0.049 Uiso calc R 1 H C17 0.3701(3) 0.8907(2) 0.8668(3) 0.0342(7) Uani d . 1 C C18 -0.1102(4) 1.2158(4) 1.0635(6) 0.0812(18) Uani d . 1 C H18A -0.1473 1.2570 1.0904 0.122 Uiso calc R 1 H H18B -0.1254 1.1564 1.0788 0.122 Uiso calc R 1 H H18C -0.1300 1.2232 0.9873 0.122 Uiso calc R 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Cd1 0.03954(15) 0.03407(14) 0.04644(16) 0.00344(11) 0.01693(12) 0.00239(11) I1 0.03901(14) 0.04346(15) 0.06101(17) 0.01086(11) 0.01734(12) 0.00414(12) I2 0.0632(2) 0.05882(19) 0.05819(18) -0.02184(14) 0.02888(15) -0.00627(13) S1 0.0314(4) 0.0493(5) 0.0406(5) -0.0001(4) 0.0092(4) 0.0064(4) S2 0.0287(4) 0.0379(5) 0.0423(5) 0.0042(3) 0.0092(3) 0.0007(4) O1 0.0299(14) 0.0544(19) 0.106(3) 0.0014(14) 0.0085(16) 0.0163(19) O2 0.0492(18) 0.059(2) 0.079(2) 0.0077(15) 0.0279(16) -0.0105(17) N1 0.0360(16) 0.0383(17) 0.0482(18) -0.0054(13) 0.0162(14) -0.0026(14) N2 0.0391(17) 0.0347(16) 0.0524(18) -0.0053(13) 0.0200(14) -0.0083(14) N3 0.056(2) 0.0388(18) 0.077(3) -0.0050(16) 0.037(2) -0.0117(18) N4 0.0375(16) 0.0376(17) 0.0477(18) 0.0063(13) 0.0160(14) 0.0024(14) N5 0.0337(15) 0.0415(17) 0.0427(16) 0.0076(13) 0.0112(13) 0.0011(14) N6 0.0339(16) 0.0465(19) 0.0475(18) 0.0112(14) 0.0068(14) -0.0072(15) C1 0.0391(19) 0.0363(19) 0.050(2) 0.0001(15) 0.0194(16) -0.0028(16) C2 0.0338(19) 0.037(2) 0.070(3) 0.0040(16) 0.0150(18) 0.0002(19) C3 0.036(2) 0.036(2) 0.077(3) 0.0022(16) 0.015(2) 0.003(2) C4 0.0315(18) 0.048(2) 0.056(2) 0.0030(16) 0.0130(17) 0.0044(19) C5 0.041(2) 0.041(2) 0.076(3) 0.0127(18) 0.022(2) 0.007(2) C6 0.047(2) 0.0336(19) 0.069(3) 0.0046(17) 0.028(2) 0.0003(18) C7 0.043(2) 0.037(2) 0.052(2) -0.0030(16) 0.0192(17) -0.0087(17) C8 0.0377(18) 0.0351(18) 0.0333(17) 0.0007(14) 0.0117(14) 0.0033(14) C9 0.041(2) 0.059(3) 0.114(5) -0.009(2) 0.007(3) 0.021(3) C10 0.0401(19) 0.0349(19) 0.045(2) 0.0007(15) 0.0187(16) 0.0022(15) C11 0.044(2) 0.0342(19) 0.054(2) -0.0056(16) 0.0149(18) -0.0070(17) C12 0.038(2) 0.039(2) 0.064(3) -0.0041(16) 0.0150(18) -0.0009(18) C13 0.046(2) 0.037(2) 0.058(2) 0.0018(17) 0.0253(19) -0.0004(18) C14 0.050(2) 0.050(2) 0.049(2) 0.0036(19) 0.0156(19) -0.0107(19) C15 0.040(2) 0.055(3) 0.048(2) 0.0023(18) 0.0113(17) -0.0063(19) C16 0.0379(19) 0.0363(19) 0.048(2) -0.0021(16) 0.0161(16) 0.0005(16) C17 0.0315(16) 0.0283(16) 0.0430(18) 0.0010(13) 0.0136(14) 0.0030(14) C18 0.051(3) 0.081(4) 0.114(5) 0.005(3) 0.033(3) -0.022(4) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cd Cd -0.8075 1.2024 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' I I -0.4742 1.8119 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag S2 Cd1 S1 100.02(3) y S2 Cd1 I2 111.93(2) y S1 Cd1 I2 110.14(2) y S2 Cd1 I1 108.76(2) y S1 Cd1 I1 109.09(3) y I2 Cd1 I1 115.730(10) y C8 S1 Cd1 96.60(10) y C17 S2 Cd1 102.60(10) y C4 O1 C9 118.1(4) ? C13 O2 C18 119.0(4) ? C7 N1 N2 116.9(3) ? C8 N2 N1 119.0(3) ? C16 N4 N5 114.3(3) ? C17 N5 N4 120.0(3) ? C6 C1 C2 118.5(4) ? C6 C1 C7 120.9(4) ? C2 C1 C7 120.4(4) ? C3 C2 C1 120.8(4) ? C4 C3 C2 119.3(4) ? O1 C4 C3 123.4(4) ? O1 C4 C5 116.2(4) ? C3 C4 C5 120.4(4) ? C6 C5 C4 119.7(4) ? C5 C6 C1 121.2(4) ? N1 C7 C1 120.7(4) ? N2 C8 N3 118.4(4) ? N2 C8 S1 119.4(3) ? N3 C8 S1 122.2(3) ? C11 C10 C15 118.2(4) ? C11 C10 C16 123.7(4) ? C15 C10 C16 118.0(4) ? C10 C11 C12 121.3(4) ? C11 C12 C13 119.6(4) ? O2 C13 C12 124.7(4) ? O2 C13 C14 115.2(4) ? C12 C13 C14 120.1(4) ? C15 C14 C13 119.7(4) ? C14 C15 C10 121.1(4) ? N4 C16 C10 123.4(4) ? N6 C17 N5 119.0(3) ? N6 C17 S2 123.3(3) ? N5 C17 S2 117.6(3) ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag Cd1 S2 2.5795(10) y Cd1 S1 2.5875(10) y Cd1 I2 2.7020(4) y Cd1 I1 2.7470(4) y S1 C8 1.725(4) y S2 C17 1.724(4) y O1 C4 1.372(5) y O1 C9 1.429(6) y O2 C13 1.368(5) y O2 C18 1.403(6) y N1 C7 1.271(5) y N1 N2 1.384(4) y N2 C8 1.319(5) y N3 C8 1.327(5) y N4 C16 1.280(5) y N4 N5 1.389(4) y N5 C17 1.326(5) y N6 C17 1.318(5) y C1 C6 1.383(5) ? C1 C2 1.400(6) ? C1 C7 1.454(5) ? C2 C3 1.386(6) ? C3 C4 1.381(6) ? C4 C5 1.392(6) ? C5 C6 1.372(6) ? C10 C11 1.388(5) ? C10 C15 1.404(6) ? C10 C16 1.454(5) ? C11 C12 1.389(6) ? C12 C13 1.391(6) ? C13 C14 1.392(6) ? C14 C15 1.381(6) ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N6 H6C S1 1_555 0.86 2.70 3.522(4) 160 yes N2 H2B S2 4_575 0.86 2.60 3.431(3) 162 yes N3 H3C I1 2_656 0.86 3.00 3.735(4) 144 yes N5 H5B I1 4_576 0.86 3.06 3.901(4) 167 yes N6 H6B O1 1_455 0.86 2.15 2.895(5) 144 yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion S2 Cd1 S1 C8 59.59(13) I2 Cd1 S1 C8 177.55(13) I1 Cd1 S1 C8 -54.41(13) S1 Cd1 S2 C17 65.16(13) I2 Cd1 S2 C17 -51.45(13) I1 Cd1 S2 C17 179.42(13) C7 N1 N2 C8 167.5(4) C16 N4 N5 C17 -170.1(4) C6 C1 C2 C3 -1.8(7) C7 C1 C2 C3 174.0(4) C1 C2 C3 C4 -0.7(7) C9 O1 C4 C3 -2.2(8) C9 O1 C4 C5 177.0(5) C2 C3 C4 O1 -178.0(5) C2 C3 C4 C5 2.9(7) O1 C4 C5 C6 178.3(4) C3 C4 C5 C6 -2.5(7) C4 C5 C6 C1 -0.2(7) C2 C1 C6 C5 2.3(7) C7 C1 C6 C5 -173.5(4) N2 N1 C7 C1 -177.9(4) C6 C1 C7 N1 157.4(4) C2 C1 C7 N1 -18.3(6) N1 N2 C8 N3 2.8(5) N1 N2 C8 S1 -178.5(3) Cd1 S1 C8 N2 80.5(3) Cd1 S1 C8 N3 -100.8(3) C15 C10 C11 C12 -0.6(6) C16 C10 C11 C12 176.5(4) C10 C11 C12 C13 0.0(6) C18 O2 C13 C12 10.4(7) C18 O2 C13 C14 -170.8(5) C11 C12 C13 O2 -179.5(4) C11 C12 C13 C14 1.8(7) O2 C13 C14 C15 178.1(4) C12 C13 C14 C15 -3.1(7) C13 C14 C15 C10 2.5(7) C11 C10 C15 C14 -0.7(7) C16 C10 C15 C14 -177.9(4) N5 N4 C16 C10 -178.8(3) C11 C10 C16 N4 14.6(6) C15 C10 C16 N4 -168.3(4) N4 N5 C17 N6 -1.8(5) N4 N5 C17 S2 175.4(3) Cd1 S2 C17 N6 -27.6(3) Cd1 S2 C17 N5 155.4(3)