#------------------------------------------------------------------------------ #$Date: 2013-12-28 14:58:47 +0100 (Sat, 28 Dec 2013) $ #$Revision: 91933 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/88/2008860.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2008860 loop_ _publ_author_name 'Rub\'en A.Toscano ' 'Alejandra Carrasco' 'Benjam\'in Ortiz' 'Rub\'en S\'anchez-Obreg\'on' 'Fernando Walle' 'Francisco Yuste' _publ_section_title ; (2S,SR)-tert-Butyl 2-(p-tolylsulfinylacetyl)pyrrolidine-1-carboxylate ; _journal_issue 9 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 1605 _journal_page_last 1607 _journal_volume 55 _journal_year 1999 _chemical_formula_sum 'C18 H25 N O4 S' _chemical_formula_weight 351.45 _chemical_name_systematic ; (2S,SR)-2-[1-(tert-Butoxycarbonyl)-pyrrolidinyl]-p-tolylsulfinylmethyl ketone ; _space_group_IT_number 19 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall 'P 2ac 2ab' _symmetry_space_group_name_H-M 'P 21 21 21' _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 9.450(2) _cell_length_b 11.5810(10) _cell_length_c 17.5440(10) _cell_measurement_reflns_used 26 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 12.50 _cell_measurement_theta_min 5.20 _cell_volume 1920.0(5) _computing_cell_refinement XSCANS _computing_data_collection 'XSCANS (Siemens, 1993)' _computing_data_reduction XSCANS _computing_molecular_graphics 'SHELXTL (Sheldrick, 1990)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SIR92 (Altomare et al, 1994)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 1.000 _diffrn_measured_fraction_theta_max 1.000 _diffrn_measurement_device_type 'Siemens P4/PC diffractometer' _diffrn_measurement_method \q/2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0000 _diffrn_reflns_av_sigmaI/netI 0.0638 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 13 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 20 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 1946 _diffrn_reflns_theta_full 25.00 _diffrn_reflns_theta_max 25.00 _diffrn_reflns_theta_min 1.50 _diffrn_standards_decay_% <3 _diffrn_standards_interval_count 97 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.188 _exptl_absorpt_correction_type none _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.216 _exptl_crystal_density_meas 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 752 _exptl_crystal_size_max 0.60 _exptl_crystal_size_mid 0.50 _exptl_crystal_size_min 0.40 _refine_diff_density_max 0.160 _refine_diff_density_min -0.187 _refine_ls_abs_structure_details ; Flack (1983) ; _refine_ls_abs_structure_Flack 0.0(2) _refine_ls_extinction_coef 0.011(2) _refine_ls_extinction_method 'SHELXL97 (Sheldrick, 1997)' _refine_ls_goodness_of_fit_ref 1.013 _refine_ls_hydrogen_treatment noref _refine_ls_matrix_type full _refine_ls_number_parameters 218 _refine_ls_number_reflns 1946 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.013 _refine_ls_R_factor_all 0.0897 _refine_ls_R_factor_gt 0.0517 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_scheme 'calc w = 1/[\s^2^(Fo^2^)+(0.0566P)^2^+0.1227P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_wR_factor_ref 0.1353 _reflns_number_gt 1298 _reflns_number_total 1946 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file bk1464.cif _[local]_cod_data_source_block o793 _cod_depositor_comments ; The following automatic conversions were performed: '_geom_bond_publ_flag' value 'Y' changed to 'y' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (17 times). Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_geom_bond_publ_flag' value 'Y' changed to 'y' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (17 times). '_geom_angle_publ_flag' value 'Y' changed to 'y' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (29 times). Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2008860 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' '-x, y+1/2, -z+1/2' 'x+1/2, -y+1/2, -z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol S1 0.81278(14) 0.75360(15) 0.05084(9) 0.0619(4) Uani d . 1 . . S O1 0.7863(4) 0.4783(3) 0.2508(2) 0.0656(11) Uani d . 1 . . O O2 0.8545(4) 0.2913(3) 0.2650(3) 0.0751(13) Uani d . 1 . . O O3 0.8848(6) 0.5018(4) 0.0756(3) 0.0929(17) Uani d . 1 . . O O4 0.7182(5) 0.7638(5) 0.1177(3) 0.0926(14) Uani d . 1 . . O N1 0.9974(4) 0.4215(4) 0.2099(3) 0.0558(11) Uani d . 1 . . N C2 1.0294(5) 0.5378(4) 0.1848(3) 0.0515(13) Uani d . 1 . . C H2 1.0060 0.5919 0.2242 0.080 Uiso d R 1 . . H C3 1.1911(6) 0.5323(5) 0.1726(4) 0.0665(16) Uani d . 1 . . C H3A 1.2205 0.5853 0.1336 0.080 Uiso d R 1 . . H H3B 1.2405 0.5501 0.2190 0.080 Uiso d R 1 . . H C4 1.2168(6) 0.4100(5) 0.1503(4) 0.0754(18) Uani d . 1 . . C H4A 1.2006 0.4006 0.0966 0.080 Uiso d R 1 . . H H4B 1.3121 0.3872 0.1617 0.080 Uiso d R 1 . . H C5 1.1120(6) 0.3393(5) 0.1963(4) 0.0618(14) Uani d . 1 . . C H5A 1.1524 0.3135 0.2435 0.080 Uiso d R 1 . . H H5B 1.0789 0.2738 0.1679 0.080 Uiso d R 1 . . H C6 0.8764(5) 0.3894(4) 0.2439(3) 0.0529(12) Uani d . 1 . . C C7 0.6587(5) 0.4694(5) 0.2975(3) 0.0572(14) Uani d . 1 . . C C8 0.5905(7) 0.5866(6) 0.2856(5) 0.100(3) Uani d . 1 . . C H8A 0.6565 0.6449 0.3012 0.080 Uiso d R 1 . . H H8B 0.5773 0.5950 0.2316 0.080 Uiso d R 1 . . H H8C 0.5025 0.5933 0.3126 0.080 Uiso d R 1 . . H C9 0.5644(7) 0.3786(8) 0.2673(5) 0.105(3) Uani d . 1 . . C H9A 0.6163 0.3098 0.2551 0.080 Uiso d R 1 . . H H9B 0.4882 0.3605 0.3015 0.080 Uiso d R 1 . . H H9C 0.5228 0.4062 0.2208 0.080 Uiso d R 1 . . H C10 0.6953(10) 0.4518(10) 0.3773(4) 0.142(5) Uani d . 1 . . C H10A 0.7840 0.4879 0.3893 0.080 Uiso d R 1 . . H H10B 0.6239 0.4731 0.4137 0.080 Uiso d R 1 . . H H10C 0.7100 0.3704 0.3839 0.080 Uiso d R 1 . . H C11 0.9537(6) 0.5691(5) 0.1117(3) 0.0615(15) Uani d . 1 . . C C12 0.9762(6) 0.6928(5) 0.0853(4) 0.0674(16) Uani d . 1 . . C H12A 1.0451 0.6935 0.0451 0.080 Uiso d R 1 . . H H12B 1.0116 0.7389 0.1265 0.080 Uiso d R 1 . . H C13 0.8837(6) 0.8940(5) 0.0321(3) 0.0574(14) Uani d . 1 . . C C14 0.9765(6) 0.9116(6) -0.0269(3) 0.0670(16) Uani d . 1 . . C H14 1.0052 0.8467 -0.0572 0.080 Uiso d R 1 . . H C15 1.0293(7) 1.0191(7) -0.0415(4) 0.086(2) Uani d . 1 . . C H15 1.0929 1.0310 -0.0834 0.080 Uiso d R 1 . . H C16 0.9894(10) 1.1129(7) 0.0028(5) 0.095(3) Uani d . 1 . . C C17 0.8964(9) 1.0948(6) 0.0607(5) 0.098(2) Uani d . 1 . . C H17 0.8684 1.1599 0.0910 0.080 Uiso d R 1 . . H C18 0.8426(8) 0.9857(6) 0.0756(4) 0.080(2) Uani d . 1 . . C H18 0.7796 0.9735 0.1177 0.080 Uiso d R 1 . . H C19 1.0457(12) 1.2306(9) -0.0176(6) 0.157(5) Uani d . 1 . . C H19A 0.9855 1.2860 0.0070 0.080 Uiso d R 1 . . H H19B 1.1364 1.2357 0.0069 0.080 Uiso d R 1 . . H H19C 1.0521 1.2436 -0.0715 0.080 Uiso d R 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 S1 0.0508(6) 0.0641(7) 0.0708(8) 0.0005(8) -0.0104(7) -0.0042(9) O1 0.0486(18) 0.053(2) 0.095(3) 0.0057(18) 0.018(2) 0.024(2) O2 0.061(2) 0.052(2) 0.112(3) 0.0042(18) 0.014(2) 0.025(2) O3 0.104(4) 0.071(3) 0.103(4) -0.022(3) -0.042(3) 0.005(3) O4 0.069(2) 0.094(3) 0.115(3) -0.009(3) 0.029(3) -0.008(3) N1 0.038(2) 0.053(2) 0.076(3) 0.003(2) 0.007(2) 0.008(2) C2 0.040(2) 0.047(3) 0.068(3) 0.002(2) 0.002(2) 0.005(3) C3 0.040(3) 0.074(4) 0.085(4) 0.000(3) 0.004(3) 0.004(3) C4 0.052(3) 0.076(4) 0.098(5) 0.013(3) 0.015(3) 0.003(4) C5 0.052(3) 0.061(3) 0.073(4) 0.011(3) 0.002(3) -0.002(3) C6 0.046(3) 0.051(3) 0.062(3) 0.003(2) -0.004(3) 0.011(3) C7 0.042(3) 0.070(3) 0.059(3) 0.002(3) 0.005(2) 0.015(3) C8 0.073(4) 0.081(5) 0.146(7) 0.016(4) 0.047(5) 0.011(5) C9 0.050(3) 0.127(7) 0.138(7) -0.014(4) 0.013(4) -0.022(6) C10 0.117(7) 0.246(13) 0.063(4) 0.065(9) 0.000(5) 0.008(7) C11 0.051(3) 0.061(3) 0.073(4) -0.003(3) -0.007(3) 0.009(3) C12 0.053(3) 0.066(3) 0.083(4) -0.002(3) -0.010(3) 0.015(3) C13 0.053(3) 0.057(3) 0.061(3) 0.009(3) -0.010(3) 0.002(3) C14 0.062(3) 0.077(4) 0.062(3) 0.017(3) -0.012(3) 0.013(3) C15 0.068(4) 0.099(5) 0.090(5) -0.005(4) -0.019(4) 0.041(5) C16 0.109(6) 0.078(5) 0.098(5) -0.021(5) -0.049(5) 0.027(4) C17 0.111(6) 0.062(4) 0.120(7) 0.002(4) -0.029(6) -0.012(4) C18 0.080(5) 0.081(4) 0.079(5) 0.014(4) -0.014(4) -0.012(4) C19 0.219(12) 0.107(7) 0.145(9) -0.065(9) -0.072(9) 0.048(7) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag S1 O4 . 1.479(5) y S1 C13 . 1.789(6) y S1 C12 . 1.802(6) y O1 C6 . 1.342(6) y O1 C7 . 1.463(6) y O2 C6 . 1.212(6) y O3 C11 . 1.196(7) y N1 C6 . 1.342(7) y N1 C2 . 1.449(7) y N1 C5 . 1.462(7) y C2 C11 . 1.512(8) y C2 C3 . 1.544(7) y C3 C4 . 1.489(8) y C4 C5 . 1.517(8) y C7 C10 . 1.457(9) y C7 C9 . 1.477(9) y C7 C8 . 1.517(8) y C11 C12 . 1.521(8) y C13 C18 . 1.364(8) ? C13 C14 . 1.371(8) ? C14 C15 . 1.366(10) ? C15 C16 . 1.387(11) ? C16 C17 . 1.360(12) ? C16 C19 . 1.506(11) ? C17 C18 . 1.386(10) ? loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag O4 S1 C13 107.5(3) y O4 S1 C12 106.5(3) y C13 S1 C12 95.5(3) y C6 O1 C7 121.3(4) y C6 N1 C2 124.8(4) y C6 N1 C5 121.6(4) y C2 N1 C5 113.6(4) y N1 C2 C11 112.5(5) y N1 C2 C3 102.2(4) y C11 C2 C3 111.1(5) y C4 C3 C2 103.7(5) y C3 C4 C5 105.5(5) y N1 C5 C4 102.7(4) y O2 C6 O1 125.7(5) y O2 C6 N1 122.7(5) y O1 C6 N1 111.6(4) y C10 C7 O1 110.7(5) y C10 C7 C9 112.9(7) y O1 C7 C9 110.3(5) y C10 C7 C8 111.0(7) y O1 C7 C8 102.1(4) y C9 C7 C8 109.3(5) y O3 C11 C2 123.3(5) y O3 C11 C12 121.9(6) y C2 C11 C12 114.7(5) y C11 C12 S1 110.5(4) y C18 C13 C14 119.2(6) y C18 C13 S1 119.9(5) y C14 C13 S1 120.9(5) y C15 C14 C13 120.7(7) ? C14 C15 C16 120.7(7) ? C17 C16 C15 118.2(7) ? C17 C16 C19 123.0(10) ? C15 C16 C19 118.7(9) ? C16 C17 C18 121.2(8) ? C13 C18 C17 120.0(8) ? loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C6 N1 C2 C11 -76.4(7) C5 N1 C2 C11 104.7(5) C6 N1 C2 C3 164.4(5) C5 N1 C2 C3 -14.5(7) N1 C2 C3 C4 30.4(6) C11 C2 C3 C4 -89.8(6) C2 C3 C4 C5 -35.7(7) C6 N1 C5 C4 174.2(5) C2 N1 C5 C4 -6.9(7) C3 C4 C5 N1 26.5(7) C7 O1 C6 O2 10.8(9) C7 O1 C6 N1 -169.2(5) C2 N1 C6 O2 -179.0(6) C5 N1 C6 O2 -0.1(9) C2 N1 C6 O1 1.1(8) C5 N1 C6 O1 179.9(5) C6 O1 C7 C10 63.7(8) C6 O1 C7 C9 -62.0(7) C6 O1 C7 C8 -178.1(6) N1 C2 C11 O3 -5.8(8) C3 C2 C11 O3 108.0(7) N1 C2 C11 C12 176.3(5) C3 C2 C11 C12 -69.8(7) O3 C11 C12 S1 43.7(8) C2 C11 C12 S1 -138.5(4) O4 S1 C12 C11 67.0(5) C13 S1 C12 C11 177.1(5) O4 S1 C13 C18 -2.1(6) C12 S1 C13 C18 -111.3(5) O4 S1 C13 C14 179.6(4) C12 S1 C13 C14 70.4(5) C18 C13 C14 C15 1.0(9) S1 C13 C14 C15 179.3(5) C13 C14 C15 C16 -0.4(10) C14 C15 C16 C17 -0.1(11) C14 C15 C16 C19 -177.5(7) C15 C16 C17 C18 0.0(12) C19 C16 C17 C18 177.3(8) C14 C13 C18 C17 -1.1(10) S1 C13 C18 C17 -179.4(6) C16 C17 C18 C13 0.6(12) _cod_database_fobs_code 2008860 _journal_paper_doi 10.1107/S0108270199006253